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CAZyme Information: MGYG000003712_00676

You are here: Home > Sequence: MGYG000003712_00676

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Serratia liquefaciens
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Serratia; Serratia liquefaciens
CAZyme ID MGYG000003712_00676
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
393 MGYG000003712_8|CGC2 44548.91 9.3117
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003712 5062001 MAG Estonia Europe
Gene Location Start: 48878;  End: 50059  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003712_00676.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 111 336 3e-22 0.5498839907192575

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5309 Scw11 1.31e-06 138 318 125 301
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 4.09e-04 115 357 122 373
Glycosyl hydrolases family 39.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVE76489.1 1.70e-110 12 349 1 339
AUV91435.1 1.70e-110 12 349 1 339
AID91172.1 1.90e-110 11 349 14 353
QNE54098.1 6.82e-110 12 349 1 339
AKL26000.1 1.03e-107 22 349 5 333

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 4.66e-28 25 356 105 431
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000641 0.691233 0.307387 0.000228 0.000263 0.000223

TMHMM  Annotations      download full data without filtering help

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