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CAZyme Information: MGYG000003697_00403

You are here: Home > Sequence: MGYG000003697_00403

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella copri_A
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella copri_A
CAZyme ID MGYG000003697_00403
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
584 MGYG000003697_3|CGC1 65521.32 6.761
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003697 3899884 Isolate China Asia
Gene Location Start: 20719;  End: 22473  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 26 527 3.7e-173 0.9958677685950413

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.29e-120 26 379 3 355
O-Glycosyl hydrolase family 30.
COG5520 XynC 3.36e-11 1 531 5 431
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT66374.1 0.0 1 584 1 584
QVJ80556.1 4.25e-226 35 584 200 734
BCS84534.1 4.88e-218 1 584 1 583
VEH15029.1 1.49e-211 1 580 1 578
EFI72736.1 7.67e-207 21 583 19 581

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 5.62e-79 29 529 10 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 8.88e-15 5 528 3 453
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
5CXP_A 2.59e-12 156 529 95 388
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
4CKQ_A 7.54e-08 177 490 130 371
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4UQA_A 1.32e-07 177 490 130 371
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 3.61e-07 22 528 24 471
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 9.89e-07 164 490 129 384
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000424 0.998672 0.000210 0.000248 0.000217 0.000194

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003697_00403.