CAZyme Information: MGYG000003693_02527

Basic Information

• Species: Phocaeicola plebeius_A
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola plebeius_A
• CAZyme ID: MGYG000003693_02527
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1001	MGYG000003693_25|CGC1	112253.15	7.0607

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003693	3967780	Isolate	China	Asia

• Gene Location: Start: 10821; End: 13826 Strand: +

Full Sequence      

MKSIKVLLSTVLCFCILLVENGYSKNITENSKIIKILSIGNSFSQDAVEQYLHELGEAEG
YELVIGNLFIGGCSLERHVDNIRKDAAAYDYRKIGLDGKKVHYCNMSISRALADEKWDYV
SLQQASPFSGMYETYETYLPELYEYVKERIDKRCKIVFHQTWAYAKDCRNTGFKKYDNNQ
ITMYKAIVETVKKADKLVDFYRIIPSGTAIQNARTSFIGDHLNRDGYHLDVNVGRYIAAC
TWFEVLTGKNVIGNKFVPENVSDEYRDIAQRAAHEAVCHPDKITDLSYIKDSSLYKNPSI
PVDIRVNDLLSRMTLEEKIYQLNQYTLGRNNNVNNIGEAVKNIPAEIGSLIYFETTSDLR
NSVQKKAVKESRLGIPILFGYDVIHGFRTIYPISLGQAASWNPELVEDACGVAAQEAFTS
GVNWTFSPMVDVARDGRWGRVSEGYGEDPYVNGVFAAASVRGYQGDTLSAKNKVAACLKH
YVGYGASEAGRDYVPTEISKQTLWDTYLPPFEVGIKAGAATVMSAFNNISGIPASANYYT
LTEILKKRWKHRGFVVSDWDAVKQLITQGLAANEKEAAWYAFSAGLEMDMTDNCYQKHLG
KLVKEGKVSMEAIDDAVGRILRLKFELGLFENPYTEILPDDKRFLLPSSLNVAEQLAQES
MVLLKNDKGVLPLKKEQKIAFIGPMANNRLHLLGSWSAHGDEKDVISILDGVKKEKGFLA
KNILFAEGCGFDGNEQRGFAEAIRVAEQADIIIACLGEKKTWSGENASRSVIALPRIQEE
LLENLKKTGKPLVVLLSSGRPLDLSRIEPLADAMLEIWQPGITAGIAVAGILSGRYNPSG
KLPITFPYTTGQIPIYYNHRKSGRTHQGKYQNITSEPLYSFGHGLSYTKFEYGTLKLSSS
KIRRGDTLRAEIEVKNVGNYDGKETLLWFVADPFSSITRPVKELKYFEKKEIPAGESRIF
TFDINLERDLGFVNEDGKRLLENGIFYIMVKDQKVKIELID

Enzyme Prediction     

No EC number prediction in MGYG000003693_02527.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	369	590	9.4e-68	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	306	996	38	758	beta-glucosidase BglX.
pfam16227	DUF4886	1.58e-147	35	283	1	250	Domain of unknown function (DUF4886). This domain is mainly found in uncharacterized proteins around 290 residues in length and is mainly found in various Bacteroides species. It has a curved central beta sheet flanked by helices. Distant homolog analysis showed it has a similarity with GDSL-like Lipase/Acylhydrose family. The function of this domain is still unknown.
COG1472	BglX	7.43e-103	313	716	1	395	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080	PLN03080	3.62e-87	297	999	44	779	Probable beta-xylosidase; Provisional
pfam00933	Glyco_hydro_3	2.61e-83	314	623	1	316	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ASB39105.1	0.0	31	997	5	970
QQR08785.1	0.0	31	997	22	987
ANU64819.2	0.0	31	997	5	970
QUT31469.1	0.0	290	1001	25	735
QRM99762.1	0.0	290	1001	25	735

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6R5I_A	1.11e-169	306	990	7	718	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5XXL_A	5.02e-169	302	990	10	737	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
6R5O_A	6.14e-169	306	990	7	718	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	6.33e-169	306	990	8	719	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	1.63e-168	306	990	39	750	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q56078	4.12e-169	303	998	35	758	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	1.94e-166	303	998	35	758	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
A7LXU3	1.04e-117	297	997	26	768	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
T2KMH0	1.62e-115	325	990	15	706	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9	3.31e-107	295	995	29	745	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000254	0.999092	0.000195	0.000145	0.000143	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003693_02527.