Species | Paenibacillus polymyxa | |||||||||||
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Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa | |||||||||||
CAZyme ID | MGYG000003687_01294 | |||||||||||
CAZy Family | GH3 | |||||||||||
CAZyme Description | Beta-glucosidase BoGH3B | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 97134; End: 97634 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH3 | 78 | 163 | 4.9e-20 | 0.4166666666666667 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK15098 | PRK15098 | 8.76e-34 | 10 | 157 | 42 | 178 | beta-glucosidase BglX. |
COG1472 | BglX | 4.40e-27 | 13 | 156 | 1 | 141 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
pfam00933 | Glyco_hydro_3 | 6.17e-27 | 14 | 157 | 1 | 146 | Glycosyl hydrolase family 3 N terminal domain. |
PLN03080 | PLN03080 | 1.37e-07 | 97 | 156 | 112 | 176 | Probable beta-xylosidase; Provisional |
cd08184 | Fe-ADH_KdnB-like | 0.008 | 31 | 55 | 139 | 163 | Iron-containing alcohol dehydrogenase similar to Shewanella oneidensis KdnB required for Kdo8N biosynthesis. This family contains iron-containing alcohol dehydrogenase-like proteins, many of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the iron-containing alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. This family also includes Shewanella oneidensis KdnB which is required for biosynthesis of 8-Amino-3,8-dideoxy-D-manno-octulosonic acid (Kdo8N), a unique amino sugar that has thus far only been observed on the lipopolysaccharides of marine bacteria belonging to the genus Shewanella, and thought to be important for the integrity of the bacterial cell outer membrane. KdnB requires NAD(P) and zinc ion for activity. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AHM64776.1 | 2.39e-105 | 1 | 157 | 1 | 157 |
QDA25926.1 | 2.39e-105 | 1 | 157 | 1 | 157 |
AUS25356.1 | 2.39e-105 | 1 | 157 | 1 | 157 |
QPK51803.1 | 2.39e-105 | 1 | 157 | 1 | 157 |
QPK56888.1 | 2.39e-105 | 1 | 157 | 1 | 157 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4ZOA_A | 5.24e-39 | 1 | 166 | 1 | 167 | CrystalStructure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262] |
4ZO6_A | 5.24e-39 | 1 | 166 | 1 | 167 | CrystalStructure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO6_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO7_A Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO7_B Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO8_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO8_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO9_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZO9_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZOC_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262],4ZOC_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262] |
5XXN_A | 1.16e-31 | 10 | 156 | 18 | 157 | CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482] |
5XXL_A | 1.16e-31 | 10 | 156 | 18 | 157 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
5TF0_A | 4.75e-30 | 14 | 156 | 21 | 156 | CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P33363 | 2.14e-23 | 8 | 166 | 40 | 187 | Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2 |
Q56078 | 3.45e-22 | 10 | 157 | 42 | 178 | Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2 |
A7LXU3 | 5.15e-14 | 8 | 156 | 41 | 202 | Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1 |
Q23892 | 3.27e-09 | 10 | 156 | 84 | 247 | Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2 |
T2KMH9 | 5.95e-09 | 10 | 157 | 44 | 199 | Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000061 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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