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CAZyme Information: MGYG000003684_04446
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Eisenbergiella massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eisenbergiella; Eisenbergiella massiliensis | |||||||||||
| CAZyme ID | MGYG000003684_04446 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 57346; End: 58791 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 3.36e-13 | 227 | 462 | 86 | 310 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 3.82e-11 | 235 | 391 | 247 | 397 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 1.04e-08 | 228 | 320 | 159 | 248 | polygalacturonase |
| PLN03003 | PLN03003 | 9.34e-06 | 236 | 318 | 148 | 225 | Probable polygalacturonase At3g15720 |
| pfam13229 | Beta_helix | 6.86e-05 | 227 | 323 | 1 | 88 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUL53414.1 | 2.07e-169 | 1 | 480 | 1 | 478 |
| QYR23224.1 | 6.98e-160 | 3 | 477 | 2 | 473 |
| AIQ48556.1 | 3.34e-158 | 7 | 477 | 7 | 475 |
| QOS79397.1 | 6.63e-157 | 7 | 477 | 7 | 475 |
| AIQ18871.1 | 8.78e-157 | 1 | 458 | 1 | 456 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1HG8_A | 2.44e-06 | 236 | 427 | 114 | 304 | Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
| 3JUR_A | 7.07e-06 | 208 | 467 | 180 | 422 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5AYH4 | 1.78e-09 | 194 | 457 | 235 | 495 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
| Q70HJ3 | 2.81e-07 | 239 | 462 | 158 | 371 | Probable endopolygalacturonase C OS=Aspergillus aculeatus OX=5053 GN=pgaC PE=2 SV=1 |
| A1DBR6 | 6.02e-07 | 194 | 462 | 191 | 461 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
| P49062 | 6.88e-06 | 228 | 427 | 171 | 355 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1 |
| Q2UT29 | 7.69e-06 | 236 | 462 | 260 | 483 | Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000079 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |