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CAZyme Information: MGYG000003680_00034

You are here: Home > Sequence: MGYG000003680_00034

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000433175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000433175
CAZyme ID MGYG000003680_00034
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
592 64508.02 4.6733
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003680 2339843 MAG Italy Europe
Gene Location Start: 2977;  End: 4755  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003680_00034.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 76 281 1.2e-72 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 4.18e-08 38 218 49 235
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 0.008 468 489 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 3.63e-267 25 592 5 586
AGB28243.1 1.88e-238 3 544 4 534
QCD40778.1 7.41e-231 23 592 18 598
QCP73827.1 7.41e-231 23 592 18 598
VEH16322.1 1.45e-225 23 544 26 539

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 1.24e-45 26 515 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.22e-44 26 515 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 8.28e-44 26 515 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 1.17e-43 26 515 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.17e-43 26 515 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000288 0.999016 0.000164 0.000182 0.000169 0.000145

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003680_00034.