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CAZyme Information: MGYG000003631_00542

You are here: Home > Sequence: MGYG000003631_00542

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1731;
CAZyme ID MGYG000003631_00542
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
672 75544.33 6.9762
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003631 1663259 MAG Fiji Oceania
Gene Location Start: 104;  End: 2122  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003631_00542.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 185 662 9.4e-117 0.781010719754977

CDD Domains      help

MGYG000003631_00542 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXP07840.1 3.74e-190 178 665 217 718
AGY53973.1 4.26e-185 178 665 188 684
QNN24957.1 9.59e-145 156 667 663 1212
ASV75458.1 3.88e-144 171 665 181 681
AXP07838.1 2.64e-132 187 670 219 714

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4BQ2_A 9.39e-76 185 667 197 748
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 2.51e-75 185 667 197 748
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A 5.32e-69 191 665 223 762
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A 3.86e-63 191 665 223 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 1.01e-68 191 665 432 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 6.58e-44 187 662 395 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.741541 0.257217 0.000651 0.000236 0.000152 0.000217

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003631_00542.