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CAZyme Information: MGYG000003475_01604

You are here: Home > Sequence: MGYG000003475_01604

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Selenomonas_A sp900769615
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_A; Selenomonas_A sp900769615
CAZyme ID MGYG000003475_01604
CAZy Family CBM27
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
886 MGYG000003475_27|CGC1 96923.88 6.035
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003475 2184431 MAG Fiji Oceania
Gene Location Start: 26770;  End: 29430  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003475_01604.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 243 577 2.2e-60 0.9273927392739274
CBM23 728 884 1.5e-42 0.9814814814814815
CBM27 46 205 2e-22 0.9702380952380952

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02156 Glyco_hydro_26 1.82e-47 243 575 1 288
Glycosyl hydrolase family 26.
COG4124 ManB2 1.90e-21 381 553 145 320
Beta-mannanase [Carbohydrate transport and metabolism].
pfam03425 CBM_11 1.48e-10 727 846 6 128
Carbohydrate binding domain (family 11).
pfam09212 CBM27 4.48e-05 46 206 12 169
Carbohydrate binding module 27. Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich structure comprising 13 beta strands with a single, small alpha-helix and a single metal atom.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXB85606.1 1.84e-245 40 886 97 950
QGH21752.1 5.17e-245 40 886 97 950
QGH25791.1 5.17e-245 40 886 97 950
QUF84291.1 5.92e-244 34 886 264 1127
QSX03803.1 2.33e-243 34 886 264 1127

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2BVT_A 3.85e-57 238 651 4 399
Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi]
4YN5_A 1.08e-55 238 606 47 414
Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750]
2X2Y_A 2.31e-55 238 651 4 399
Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi]
1J9Y_A 3.70e-50 237 612 6 357
Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus]
1R7O_A 4.71e-50 237 612 16 367
CrystalStructure of apo-mannanase 26A from Psudomonas cellulosa [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1A278 5.90e-55 239 854 39 649
Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1
P49424 4.97e-49 237 612 44 395
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2
P55278 2.15e-20 396 569 167 322
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1
O05512 2.21e-20 396 569 169 324
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2
P16699 3.82e-19 240 496 32 274
Mannan endo-1,4-beta-mannosidase A and B OS=Caldalkalibacillus mannanilyticus (strain DSM 16130 / CIP 109019 / JCM 10596 / AM-001) OX=1236954 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001383 0.997240 0.000303 0.000582 0.000251 0.000199

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003475_01604.