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CAZyme Information: MGYG000003457_01565
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA9732 sp001940825 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; UBA9732; UBA9732 sp001940825 | |||||||||||
| CAZyme ID | MGYG000003457_01565 | |||||||||||
| CAZy Family | GH105 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 30324; End: 32744 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 16 | 365 | 3e-102 | 0.9698795180722891 |
| GH28 | 390 | 758 | 1.7e-76 | 0.9107692307692308 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07470 | Glyco_hydro_88 | 2.31e-78 | 3 | 365 | 3 | 340 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
| COG4225 | YesR | 4.00e-74 | 39 | 365 | 53 | 354 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
| COG5434 | Pgu1 | 1.61e-55 | 391 | 793 | 112 | 528 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 9.76e-32 | 390 | 693 | 3 | 250 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 3.47e-23 | 453 | 699 | 108 | 307 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AEE17954.1 | 2.41e-135 | 385 | 795 | 28 | 439 |
| AEC01281.1 | 1.11e-129 | 396 | 795 | 37 | 436 |
| ADY14832.1 | 1.05e-124 | 398 | 804 | 38 | 446 |
| QYM77801.1 | 4.12e-123 | 20 | 755 | 61 | 816 |
| ACB77543.1 | 1.19e-119 | 14 | 789 | 59 | 854 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4WU0_A | 7.56e-79 | 20 | 365 | 23 | 359 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 1NC5_A | 5.93e-62 | 3 | 365 | 18 | 365 | Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis] |
| 2GH4_A | 2.29e-61 | 3 | 365 | 8 | 355 | ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis] |
| 3JUR_A | 2.71e-39 | 364 | 756 | 31 | 411 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.71e-34 | 391 | 678 | 74 | 355 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O34559 | 3.25e-61 | 3 | 365 | 18 | 365 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| P27644 | 7.28e-35 | 512 | 742 | 9 | 247 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| P0A3U6 | 2.18e-34 | 134 | 363 | 4 | 227 | Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1 |
| P0A3U7 | 2.18e-34 | 134 | 363 | 4 | 227 | 24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1 |
| A7PZL3 | 2.25e-31 | 392 | 775 | 96 | 457 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000034 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |