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CAZyme Information: MGYG000003440_01241

You are here: Home > Sequence: MGYG000003440_01241

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerobiospirillum succiniciproducens
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Anaerobiospirillum; Anaerobiospirillum succiniciproducens
CAZyme ID MGYG000003440_01241
CAZy Family GT104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
418 MGYG000003440_73|CGC1 47164.68 4.8676
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003440 3625053 MAG Fiji Oceania
Gene Location Start: 9251;  End: 10507  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003440_01241.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT104 1 322 1.6e-72 0.820580474934037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam10093 DUF2331 8.76e-89 5 409 2 372
Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function.
TIGR03837 EarP 4.62e-84 5 409 2 370
Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P.
COG4394 EarP 2.11e-68 1 315 1 301
Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIZ33548.1 3.89e-61 5 323 11 320
AXO90888.1 5.19e-60 5 323 6 315
ANY86085.1 1.41e-55 5 317 6 310
QXI44720.1 5.34e-55 5 317 6 309
BBR52987.1 5.47e-55 5 317 6 310

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6J7M_A 3.24e-49 1 314 20 325
Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1]
6J7L_A 3.88e-49 1 314 20 325
Crystalstructure of Pseudomonas aeruginosa Earp in complex with TDP [Pseudomonas aeruginosa PAO1]
5NV8_A 2.15e-48 5 317 19 323
Structuralbasis for EarP-mediated arginine glycosylation of translation elongation factor EF-P [Pseudomonas putida KT2440]
6J7J_A 5.62e-48 3 314 22 325
Crystalstructure of Pseudomonas aeruginosa Earp [Pseudomonas aeruginosa PAO1],6J7K_A Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha [Pseudomonas aeruginosa PAO1]
5WXI_A 1.47e-28 6 315 10 305
EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9HZZ1 1.14e-48 1 314 1 306
Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1
Q88LS1 8.74e-48 5 317 6 310
Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1
Q8EEP8 7.93e-37 5 313 11 323
Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1
A0A0T7AQA7 1.20e-28 6 312 10 302
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1
E6MVV9 8.05e-28 6 315 10 305
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003440_01241.