CAZyme Information: MGYG000003424_00572

Basic Information

• Species: SFTJ01 sp004557385
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; SFTJ01; SFTJ01 sp004557385
• CAZyme ID: MGYG000003424_00572
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
864		95693.89	4.6684

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003424	2699357	MAG	Fiji	Oceania

• Gene Location: Start: 342; End: 2936 Strand: -

Full Sequence      

MKNNLINGVFAAMLAVGMLSGCNAGKVECVSLCEALPDSAWNASQWISVVDAPVVEGVVQ
DGTRAADGANWFVSTLKNDKKVVSAKWMTTGLGVYDIYINGKLIGNEVLKPGFTHPEKTK
RSFTYDVTEALCTEQGAENVLSAQVTPGWWADKIVTPGGHEGMIGRKCAFRGVIELTYDD
GTKALFGTDTIAWKAGIAGPVKHAAIFDGEVYDARIKPGYETPELLKTPEINTEFAGEIV
PTCGAEIYLREDLALSPVKAYTWESVEGESAEEYGKVVIKKEFVEGEVIEVHPGEHLVVD
FGQNCAAVPSFEFAAKEGTTLTCEVSELLNDGNGAKNRGMDGPEGSVHRLNLRIPDTGMK
LEYTFAASEDAVAYQPRCTFFGYRLVSITVSDDVTIHSIHSVPVTSITKALESGVITTGD
ESINKLISNTYWGQLSNYLSVPTDCPQRNERLGWTADTQVFSETGTFFADTRAFFHKWMR
DMRDTQSPAGGFPGVAPWAQYGAEPQSMMRLGWSDAGVIVPWVIWKQFGDAEIVTENWDA
MEKLMNHIDETKYDHHALAAENGNYQWADWLSYEPLESCSGTMRDVDAKGEWFIRPETYD
YWNYLSASYWAINASMMRDMAAATGRDAAKYEAMTQRAKEYLRTTFLNEDGTFKTEILNT
MQTPALFALKNGLVEGSAKENLVARLRKNFAEHENCLQTGFLGTSILMPTLTENGMVDIA
YELLFQRKNPSWLYSVDNGATTIWERWNSYMIDKGMGPQGMNSFNHYAYGVVCGWIWSSV
AGIATDVAHPGFKHIIMKPQPDKRLGFVKAEYKSAAGVIKSEWRYEGDVWKWTFTIPEDA
TASVTLPGETEAKEYTAGTYSVEK

Enzyme Prediction     

No EC number prediction in MGYG000003424_00572.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	290	846	1.8e-138	0.9940476190476191

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.84e-100	412	780	2	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	3.59e-30	80	229	1	146	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam17390	Bac_rhamnosid_C	1.13e-16	790	854	7	71	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam05592	Bac_rhamnosid	4.79e-11	289	402	1	99	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUR48396.1	0.0	34	864	40	868
QUT20979.1	0.0	34	864	32	860
BBK93107.1	0.0	35	864	41	868
QIX65068.1	0.0	34	864	40	868
QJE29828.1	0.0	34	864	40	868

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	1.97e-109	39	860	285	1009	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	8.74e-73	79	849	141	849	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6I60_A	2.47e-70	69	847	176	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	8.49e-109	39	860	285	1009	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	1.12e-107	36	847	144	879	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	5.37e-99	41	847	146	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	7.99e-51	36	846	141	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000001	0.001478	0.998570	0.000000	0.000001	0.000001

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003424_00572.