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CAZyme Information: MGYG000003383_01459

You are here: Home > Sequence: MGYG000003383_01459

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_01459
CAZy Family GH2
CAZyme Description Beta-glucuronidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
608 MGYG000003383_19|CGC3 67965.2 5.0954
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 112970;  End: 114796  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.31

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 11 601 3e-104 0.6117021276595744

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 0.0 5 603 1 592
beta-D-glucuronidase; Provisional
COG3250 LacZ 7.07e-108 13 604 9 596
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 6.96e-77 281 605 1 299
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340 ebgA 2.67e-35 73 581 113 556
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 1.67e-30 163 425 195 462
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ30980.1 0.0 1 608 1 608
QUC02528.1 2.91e-263 1 603 1 602
QBE95891.1 1.09e-243 4 605 5 598
QIB58662.1 5.26e-243 5 605 1 593
QMW81249.1 5.26e-243 5 605 1 593

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6ED2_A 4.84e-240 1 603 24 619
ChainA, Glycosyl hydrolase family 2, TIM barrel domain protein [Faecalibacterium duncaniae]
7KGY_A 4.06e-238 4 603 5 597
ChainA, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_B Chain B, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_C Chain C, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_D Chain D, Beta-glucuronidase [Faecalibacterium prausnitzii]
6EC6_A 5.42e-228 6 606 30 622
Ruminococcusgnavus Beta-glucuronidase [[Ruminococcus] gnavus],6EC6_B Ruminococcus gnavus Beta-glucuronidase [[Ruminococcus] gnavus]
6JZ1_A 3.22e-226 6 606 7 599
Apostructure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ1_B Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ5_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ5_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ6_A b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ6_B b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_A b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_B b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ8_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus],6JZ8_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus]
5Z18_A 7.42e-226 6 606 31 623
Thecrystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_B The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_C The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_D The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_E The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_F The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z19_A The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_B The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_C The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_D The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_E The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_F The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],6JZ2_A b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ2_B b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ3_A b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ3_B b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ4_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus],6JZ4_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P05804 9.86e-168 5 603 1 588
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
Q5R5N6 4.56e-131 1 603 23 626
Beta-glucuronidase OS=Pongo abelii OX=9601 GN=GUSB PE=2 SV=2
O77695 2.34e-130 1 603 20 623
Beta-glucuronidase (Fragment) OS=Chlorocebus aethiops OX=9534 GN=GUSB PE=2 SV=1
P08236 3.59e-130 1 603 23 626
Beta-glucuronidase OS=Homo sapiens OX=9606 GN=GUSB PE=1 SV=2
O18835 5.07e-130 1 603 23 625
Beta-glucuronidase OS=Canis lupus familiaris OX=9615 GN=GUSB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_01459.