Species | Pseudescherichia sp002298805 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pseudescherichia; Pseudescherichia sp002298805 | |||||||||||
CAZyme ID | MGYG000003365.1_02964 | |||||||||||
CAZy Family | PL22 | |||||||||||
CAZyme Description | Oligogalacturonate lyase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 65939; End: 67114 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
PL22 | 215 | 385 | 1.5e-78 | 0.6415094339622641 |
PL22 | 32 | 138 | 1e-30 | 0.39245283018867927 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam14583 | Pectate_lyase22 | 0.0 | 1 | 385 | 1 | 385 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
COG0823 | TolB | 3.39e-35 | 27 | 367 | 82 | 407 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
PRK04792 | tolB | 9.32e-10 | 245 | 388 | 225 | 351 | Tol-Pal system protein TolB. |
PRK00178 | tolB | 1.80e-09 | 245 | 383 | 206 | 319 | Tol-Pal system protein TolB. |
PRK05137 | tolB | 7.74e-09 | 197 | 379 | 162 | 318 | Tol-Pal system protein TolB. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QJT82390.1 | 3.43e-281 | 1 | 391 | 1 | 391 |
ANI81440.1 | 6.93e-281 | 1 | 391 | 1 | 391 |
AGN85574.1 | 2.82e-280 | 1 | 391 | 1 | 391 |
SKC16929.1 | 2.82e-280 | 1 | 391 | 1 | 391 |
QHM93528.1 | 2.82e-280 | 1 | 391 | 1 | 391 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3PE7_A | 1.03e-209 | 1 | 384 | 1 | 384 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
3C5M_A | 2.87e-190 | 2 | 390 | 2 | 390 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P21258 | 2.18e-206 | 1 | 384 | 1 | 384 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
Q59418 | 4.17e-204 | 1 | 384 | 1 | 384 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000044 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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