CAZyme Information: MGYG000003365.1_00187

Basic Information

• Species: Pseudescherichia sp002298805
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pseudescherichia; Pseudescherichia sp002298805
• CAZyme ID: MGYG000003365.1_00187
• CAZy Family: GH3
• CAZyme Description: Beta-glucosidase BoGH3B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
765	MGYG000003365.1_5|CGC4	83346.65	5.8799

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003365.1	4272522	MAG	United States	North America

• Gene Location: Start: 178899; End: 181196 Strand: -

Full Sequence      

MKWLCSVGVAVGLALQPALAEDTSANHPLTPQARDAYVTDLLKKMTVDEKIGQLRLISVG
PDNPKEAIRDMIKASQVGAIFNTVTRQDIRAMQDQAMQLSRLKIPLFFAFDVVHGQRTVF
PISLGLASSFDLDAVKTVGRISAYEAADDGLNMTWAPMVDVTRDPRWGRGSEGFGEDTYL
TAMMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY
KAALDAGSGGVMIALNSLNGTPASSDSWLLKDLLRDDWKFKGITISDHGAIKELIKHGTA
ADPEDAVRVAIKSGVDMSMADEYYSKYLPGLIKSGKVTMDELDDATRHVLNVKYDMGLFN
DPYSHLGPKESDPQDTNAESRLHRKEAREVARESMVLLKNRLETLPLKKSATVAVVGPLA
DSKRDVMGSWSAAGVSDQSVTVLTGIKNAVGSEGKVIFAKGANVTNDKDIITFLNQYEPA
IQVDERTPQAMIDEAVKAANDADVVVAVVGESQGMAHEASSRTDITIPQSQQDLIAALKA
TGKPLVLVLMNGRPLAMVKQDQQADAILETWFAGTEGGNAVADVLFGYYNPSGKLPISFP
RSVGQIPVYYSHLNTGRPYNAEHPNKYTSRYFDEANGPLYPFGYGLSYTTFSVSDVKLSA
PTLSRDGTVTASVDVTNTGKREGATVMQMYIQDVTASQSRPVKELKGFDKVNLKPGETQT
VSFPIDINALKFWNQKMKYDAEPGKFNVFIGTDSARVKQAQFALQ

Enzyme Prediction     

EC	3.2.1.21	3.2.1.-	3.2.1.37

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	98	319	2.8e-66	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	1	765	1	765	beta-glucosidase BglX.
pfam00933	Glyco_hydro_3	2.14e-124	46	352	1	316	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	1.12e-115	45	451	1	388	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080	PLN03080	3.99e-78	1	726	3	743	Probable beta-xylosidase; Provisional
pfam01915	Glyco_hydro_3_C	1.82e-59	395	648	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCU54867.1	0.0	1	764	1	764
QNQ21069.1	0.0	1	765	1	765
QAR45672.1	0.0	1	765	1	765
APZ07249.1	0.0	1	765	1	765
AZI86939.1	0.0	1	765	1	765

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6R5I_A	0.0	34	764	3	732	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	0.0	24	764	27	764	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	0.0	34	764	3	732	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	0.0	34	764	4	733	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5XXL_A	3.45e-229	30	765	6	752	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q56078	0.0	1	764	1	764	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	0.0	1	764	1	764	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0	4.04e-127	1	754	1	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9	1.53e-115	26	765	31	755	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	5.42e-105	1	751	4	762	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000216	0.999149	0.000173	0.000155	0.000147	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003365.1_00187.