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CAZyme Information: MGYG000003359_00457

You are here: Home > Sequence: MGYG000003359_00457

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A sp900766135
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A sp900766135
CAZyme ID MGYG000003359_00457
CAZy Family PL29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
885 MGYG000003359_3|CGC7 96917.73 5.1781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003359 5721146 MAG United States North America
Gene Location Start: 300855;  End: 303512  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003359_00457.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL29 92 378 4.6e-25 0.9169435215946844
CBM32 767 880 3.3e-17 0.9032258064516129

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.06e-13 764 880 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam12708 Pectate_lyase_3 9.32e-11 92 160 2 62
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434 Pgu1 4.06e-06 80 135 66 124
Polygalacturonase [Carbohydrate transport and metabolism].
cd00057 FA58C 5.61e-05 782 880 32 137
Substituted updates: Jan 31, 2002
smart00231 FA58C 1.20e-04 777 872 26 129
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QLG40566.1 0.0 1 884 1 887
QOS79355.1 0.0 1 883 1 886
QAY65253.1 0.0 42 883 41 885
QNK56161.1 1.49e-212 43 883 261 1110
QRO01698.1 3.98e-128 48 566 31 546

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D29_A 1.74e-25 762 884 11 134
CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2]
5XNR_A 3.20e-23 762 884 11 134
TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2]
5ZU6_A 6.31e-21 763 877 35 151
ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio]
5ZU5_A 8.92e-19 763 877 35 151
Crystalstructure of a full length alginate lyase with CBM domain [Vibrio splendidus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9ZFG9 2.69e-06 99 185 8 95
Alginate lyase 7 OS=Azotobacter vinelandii OX=354 GN=algE7 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000505 0.998581 0.000364 0.000192 0.000169 0.000148

TMHMM  Annotations      download full data without filtering help

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7 29