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CAZyme Information: MGYG000003355_00917

You are here: Home > Sequence: MGYG000003355_00917

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium phytofermentans_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium phytofermentans_A
CAZyme ID MGYG000003355_00917
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1084 MGYG000003355_40|CGC1 126056.79 6.0055
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003355 5194070 MAG China Asia
Gene Location Start: 31281;  End: 34535  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003355_00917.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 5 755 8.7e-61 0.7851941747572816

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.00e-07 219 586 402 755
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.003 555 602 53 98
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH35967.1 1.21e-264 4 1082 4 1045
ADI14960.1 1.46e-263 10 1080 9 1091
QLG38740.1 9.34e-249 10 1081 10 1108
QZN75981.1 4.15e-244 10 1078 10 1104
APO47442.1 2.58e-242 10 1078 10 1104

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003355_00917.