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CAZyme Information: MGYG000003335_01338

You are here: Home > Sequence: MGYG000003335_01338

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066135 sp900543575
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066135; GCA-900066135 sp900543575
CAZyme ID MGYG000003335_01338
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
754 MGYG000003335_151|CGC1 85417.19 5.2877
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003335 3295822 MAG China Asia
Gene Location Start: 15746;  End: 18010  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003335_01338.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 1 410 4.9e-28 0.5036407766990292

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03143 A4_beta-galactosidase_middle_domain 7.67e-07 169 279 1 93
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam08532 Glyco_hydro_42M 6.06e-04 168 268 2 87
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS98191.1 4.19e-222 1 727 303 1033
CEP78513.1 1.14e-220 1 727 302 1033
AEF82861.1 8.79e-217 1 727 302 1035
QCU02329.1 1.22e-215 1 725 301 1061
AJG98234.1 5.33e-212 1 725 304 1030

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003335_01338.