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CAZyme Information: MGYG000003252_03256

You are here: Home > Sequence: MGYG000003252_03256

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900761785
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900761785
CAZyme ID MGYG000003252_03256
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
547 MGYG000003252_309|CGC2 59953.39 4.3969
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003252 8296673 MAG United States North America
Gene Location Start: 37015;  End: 38658  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003252_03256.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 140 466 2.6e-57 0.9826388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02432 PLN02432 6.28e-25 142 472 15 291
putative pectinesterase
COG4677 PemB 1.53e-24 121 428 58 376
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02990 PLN02990 3.48e-23 134 474 255 561
Probable pectinesterase/pectinesterase inhibitor
178372 PLN02773 4.91e-23 142 414 9 249
PLN02773 pectinesterase
pfam01095 Pectinesterase 1.03e-22 139 470 1 298
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL41085.1 1.07e-295 1 547 1 542
QDM11674.1 1.52e-295 1 547 1 542
QGT73504.1 1.52e-295 1 547 1 542
QUT78075.1 1.52e-295 1 547 1 542
QRQ55768.1 5.06e-294 1 547 1 542

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5C1E_A 7.04e-16 147 425 16 260
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 9.48e-16 147 425 16 260
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
4PMH_A 3.56e-13 146 358 45 252
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]
2NSP_A 3.98e-13 138 474 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2NTB_A 2.31e-11 138 474 4 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBT4 2.83e-19 130 425 24 285
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
Q9FJ21 9.67e-19 134 474 254 560
Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
O22256 2.20e-18 142 472 248 546
Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana OX=3702 GN=PME20 PE=2 SV=2
O04886 3.01e-17 139 472 273 572
Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1
Q8GXA1 9.00e-17 139 475 257 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.174980 0.824531 0.000066 0.000074 0.000065

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003252_03256.