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CAZyme Information: MGYG000003237_01568

You are here: Home > Sequence: MGYG000003237_01568

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp002998355
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
CAZyme ID MGYG000003237_01568
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
609 68061.49 7.1213
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003237 4618450 MAG United States North America
Gene Location Start: 1007;  End: 2836  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003237_01568.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 67 259 4.7e-31 0.5127610208816705

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 5.54e-06 33 231 29 254
Glycosyl hydrolases family 39.
smart00633 Glyco_10 0.004 61 175 1 122
Glycosyl hydrolase family 10.
COG3693 XynA 0.007 27 179 37 190
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44901.1 0.0 1 609 1 609
AHF90941.1 3.21e-153 23 598 230 817
AVM44885.1 9.46e-81 24 600 26 584
QDU57372.1 6.91e-65 25 595 28 589
QEM48006.1 2.84e-31 46 271 51 296

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 7.33e-10 28 248 107 342
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000253 0.999096 0.000192 0.000157 0.000153 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003237_01568.