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CAZyme Information: MGYG000003237_01359

You are here: Home > Sequence: MGYG000003237_01359

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp002998355
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
CAZyme ID MGYG000003237_01359
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1045 MGYG000003237_38|CGC1 114439.03 6.4397
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003237 4618450 MAG United States North America
Gene Location Start: 482;  End: 3619  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003237_01359.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 363 557 4e-28 0.4547563805104408

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 5.58e-11 357 491 69 195
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 5.37e-10 357 484 46 164
Glycosyl hydrolase family 10.
smart00633 Glyco_10 4.06e-08 357 484 3 124
Glycosyl hydrolase family 10.
pfam02449 Glyco_hydro_42 1.59e-07 344 450 21 141
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874 GanA 1.31e-04 351 572 48 251
Beta-galactosidase GanA [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45381.1 0.0 1 1045 1 1045
AVM44457.1 8.30e-163 2 1036 3 1054
AHF89348.1 2.38e-23 354 521 418 582
SQI35982.1 1.53e-21 298 521 18 235
AGS80957.1 4.60e-21 357 547 59 246

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FHE_A 2.85e-06 360 490 60 196
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
6LVW_A 2.90e-06 342 450 24 146
PolyextremophilicBeta-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi [Halorubrum lacusprofundi ATCC 49239]
4W8L_A 3.00e-06 360 491 52 192
Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
1UQY_A 3.27e-06 338 446 53 157
XylanaseXyn10B mutant (E262S) from Cellvibrio mixtus in complex with xylopentaose [Cellvibrio mixtus],1UQZ_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with 4-O-methyl glucuronic acid [Cellvibrio mixtus],1UR1_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with arabinofuranose alpha-1,3 linked to xylobiose [Cellvibrio mixtus],1UR2_A Xylanase Xyn10B mutant (E262S) from Cellvibrio mixtus in complex with arabinofuranose alpha 1,3 linked to xylotriose [Cellvibrio mixtus]
2CNC_A 3.35e-06 338 446 62 166
Family10 xylanase [Cellvibrio mixtus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94804 5.19e-06 342 450 24 146
Beta-galactosidase BgaH OS=Haloferax lucentense (strain DSM 14919 / JCM 9276 / NCIMB 13854 / Aa 2.2) OX=1230452 GN=bgaH PE=1 SV=2
I1S3T9 8.40e-06 353 490 70 198
Endo-1,4-beta-xylanase C OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003084 0.963837 0.032276 0.000263 0.000271 0.000244

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003237_01359.