CAZyme Information: MGYG000003237_00476

Basic Information

• Species: Victivallis sp002998355
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
• CAZyme ID: MGYG000003237_00476
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1154		128998.8	8.1483

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003237	4618450	MAG	United States	North America

• Gene Location: Start: 67814; End: 71278 Strand: -

Full Sequence      

MSRSILHLLLAAASCLAALSAAAAGAPPSFWYWHEAKPLDRSTRFFRVELELPGEVQSAP
VFFACDDRGIIRVNGTQLQKFQSWHAKRHNLAPLLKAGKNVISFEVYNGLPPAGVLFRGE
ILLKDGTVIPLASNGNIRSSAEAPEGWTLPEFDASGWKMAEKIGPADRKPWSELADMTPF
YAVERPVIDEKNLGRIPLDDFADISSWLGGYGPGARPGAAHPFSFSFGSVPDPRREDGWA
GAMHFDTVAPRGEARFGKNSIFKMPAVPAALLFSADPEGNAGEVRFAFVDRFDRTFTTVP
VRIEGRGWKDYRLDLNAETLPGYEKIGFPIALRTIFYRNDKPAKSRILLDDFFYIADMSN
PAKQLEVRPDYTALNRPAGEPVLLSYRLRNARNERIDASLELKVYDPERKLVQSRRAKAS
VGAGGFGRVSFRLDPFRRFGGYCVEVTASNGHVSHTVRGWLGVFTPNNGRFNKIPMWFGV
EDQEVNTAPYEAKLHAEWMKLLGVDMIRGGLLGHGVEGARGESIGFDGYRRLWQPHVDAG
LDICLDYAGGIPNWTKGKDPKPAGALWPSGRNPELFREHIRHVAEFTKSIPAVKYFEWFN
EPNLSRGINVPEYMESMRQLYPIFKQINPSVRIGTGGNVIGPHPNAAPGFLEQAYQVNSD
FYDIALYHAHDGTRDYKRFTQRLRDMLAEKKLKKPFANTETGYRSYQNQPELFYNQARIL
VQKLAYSRSVGMEFYVWFMLQDYWDKYINADDSFGLVTVDNQPKPSFVAYNELIRQLANT
VPAAAPELDSRLESYRFTTGEEEVYAAWPKQEKAEFSFCLRSEVPVRLIDIFGNVEVLAP
VNGIVFVNTKPLPFYLRAKKGAVSAVGELVKTAENAVRLPGETRPLELEFRNPYRETVKF
TLRQGDETLSGSAAPGERKKLALKLAVGADAEPGVLRLPVSLELAAAKGRLLYRGDLVLR
AFIAQPVGAVDAARPIRLDDESKLTELVFDPTTPRWAGKDDLSAEIRVGRRADRLVFEAD
VRDQDHSVPMSGAMNWRNDSIQLGFANRRGEHSELTVSGGPDGRPIAWCHHSPDPAKIGA
AAIPLEITREEGVTHYRFEIPLAFLKIGTQPGELFRMALLVNDNDSGKRLRLMEHFGGIE
GGKDTELFGWCRLQ

Enzyme Prediction     

No EC number prediction in MGYG000003237_00476.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM67	31	171	1.3e-20	0.9829545454545454

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd09621	CBM9_like_5	1.52e-44	975	1153	2	188	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
cd09619	CBM9_like_4	2.17e-07	996	1127	30	163	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other domains.
cd00241	DOMON_like	2.72e-05	987	1129	3	152	Domon-like ligand-binding domains. DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.
pfam01229	Glyco_hydro_39	0.005	485	770	22	344	Glycosyl hydrolases family 39.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46501.1	0.0	1	1154	1	1154
AHF92778.1	1.20e-295	25	1153	33	1177
AVM46714.1	3.56e-202	195	1153	26	968
AVM46712.1	2.63e-158	195	1154	75	1012
AVM46271.1	2.84e-150	195	1150	22	962

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.004669	0.990880	0.002341	0.001471	0.000325	0.000283

TMHMM  Annotations     

start	end
5	27