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CAZyme Information: MGYG000003189_01205

You are here: Home > Sequence: MGYG000003189_01205

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Haemophilus_D parainfluenzae_M
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_D; Haemophilus_D parainfluenzae_M
CAZyme ID MGYG000003189_01205
CAZy Family GT25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
256 MGYG000003189_15|CGC1 29310.57 5.2075
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003189 2132219 MAG United States North America
Gene Location Start: 29256;  End: 30026  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003189_01205.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT25 3 187 9.3e-33 0.9226519337016574

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3306 COG3306 3.94e-43 3 253 9 250
Glycosyltransferase involved in LPS biosynthesis, GR25 family [Cell wall/membrane/envelope biogenesis].
pfam01755 Glyco_transf_25 1.34e-39 4 197 5 200
Glycosyltransferase family 25 (LPS biosynthesis protein). Members of this family belong to Glycosyltransferase family 25 This is a family of glycosyltransferases involved in lipopolysaccharide (LPS) biosynthesis. These enzymes catalyze the transfer of various sugars onto the growing LPS chain during its biosynthesis.
cd06532 Glyco_transf_25 3.34e-25 4 197 3 128
Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOR09013.1 2.38e-177 1 256 2 257
QOR07166.1 7.96e-176 1 256 2 257
VEI31956.1 1.55e-175 1 256 1 256
QOR23823.1 1.61e-175 1 256 2 257
QOR16281.1 3.24e-175 1 256 2 257

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P71398 3.97e-131 1 255 2 256
Lsg locus putative protein 4 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1697 PE=3 SV=1
Q17FB8 2.45e-08 4 188 326 494
Glycosyltransferase 25 family member OS=Aedes aegypti OX=7159 GN=AAEL003481 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003189_01205.