CAZyme Information: MGYG000003178_02731

Basic Information

• Species: Klebsiella quasivariicola
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella quasivariicola
• CAZyme ID: MGYG000003178_02731
• CAZy Family: GH0
• CAZyme Description: HTH-type transcriptional activator RhaR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
663		76724.37	9.8242

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003178	3011876	MAG	United States	North America

• Gene Location: Start: 386; End: 2377 Strand: -

Full Sequence      

MRQLLVSGLVNHPGHSRLEANRWLSEMALLLATRFSQPIASMPRRDAEPWSRRIASVVAR
IDANYQRRLSLQEVAAAEFVSEAWLSRLFRKEVGVSFVQYLTALRLRHAADQLSATRKPV
QQIAREQGFASTRMMSDLFKRQHGVTPRQYREQHPRELARPRPPLADRWQPVALDRLYAR
LNEPEKRDRESPPLLINPPQTREINLQERPARSAVLRHTRMVVTVRELDDLLREDVRREL
EHLHRTLPVYAVDINDPFLSSRLFGTGWDDPQMAGYACWYNLQQIFSWLAAMGWHVILHT
GVTTRSDLLQRFLQLAANHFPPATLNSWRVVWHWSPQASEATRQAAWRQQREVLDRLLPQ
PQLGIWHRFAASDPGDDPLFHSPLLAEADFLACQADANEQLDLAQADSSRLASSEHYPLH
KLRQIHSALRQRQLNLPLWLLSWNTLTGDTRDTNGRFFRGALLMDNLLGVADQVWLAGFW
LNSGLQGEARSNGKLDTSSLALHYLHGLPRPVYWVLWLWRRLRGEILFHDRNLLLLHHQG
HYQLLLRNTVVYNPWLSSEAAFIQRFSQPYSVKLLGLAGRWRIKQHLFDQHHGALFPLVD
AFRSRSGPDAEDYQWLMHQARPALSVEEARLDGHWLRIDSLESNALALYEFTPQLSSGED
PVP

Enzyme Prediction     

No EC number prediction in MGYG000003178_02731.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00342	HTH_ARAC	4.07e-24	68	151	1	84	helix_turn_helix, arabinose operon control protein.
COG2207	AraC	4.38e-24	40	156	8	124	AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
COG3664	XynB	6.35e-23	378	653	146	426	Beta-xylosidase [Carbohydrate transport and metabolism].
COG4977	GlxA	4.84e-21	36	153	206	321	Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].
pfam12833	HTH_18	6.41e-20	74	153	1	81	Helix-turn-helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHW97810.1	0.0	1	663	110	772
QRF10665.1	0.0	1	663	111	773
QTI09128.1	0.0	1	663	111	773
QIX72640.1	0.0	1	663	111	773
QQM83895.1	0.0	1	663	111	773

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6SWI_A	4.38e-12	66	151	20	105	TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
1BL0_A	9.06e-09	41	151	2	110	MultipleAntibiotic Resistance Protein (Mara)DNA COMPLEX [Escherichia coli]
1XS9_A	9.70e-09	41	151	5	113	ChainA, Multiple antibiotic resistance protein marA [Escherichia coli]
3OIO_A	8.96e-07	53	153	8	108	Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q5HJR8	5.48e-33	53	626	156	714	Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2
Q6GD21	1.74e-32	53	626	156	714	Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6	1.74e-32	53	626	156	714	Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GKK1	3.09e-32	53	626	156	714	Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q99XB1	7.33e-32	53	626	156	714	Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000039	0.000002	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003178_02731.