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CAZyme Information: MGYG000003163_00426

You are here: Home > Sequence: MGYG000003163_00426

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900546645
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900546645
CAZyme ID MGYG000003163_00426
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
520 MGYG000003163_8|CGC1 58584.79 6.86
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003163 2819390 MAG United States North America
Gene Location Start: 14378;  End: 15940  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 27 518 1.4e-188 0.9958677685950413

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 6.30e-139 25 389 1 366
O-Glycosyl hydrolase family 30.
COG5520 XynC 2.81e-09 149 518 124 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 2.31e-07 421 517 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR78595.1 7.34e-291 5 519 6 520
QUT59995.1 2.98e-290 5 519 6 520
QQY41954.1 2.98e-290 5 519 6 520
ALK83243.1 4.23e-290 5 519 6 520
QQY38682.1 2.44e-289 5 519 6 520

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 7.13e-89 28 518 8 495
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 1.13e-11 37 518 34 452
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
1NOF_A 2.57e-09 149 519 84 382
ChainA, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi]
7O0E_A 6.91e-08 344 465 287 386
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7NCX_AAA 7.29e-08 344 465 294 393
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 1.29e-07 4 465 3 410
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000319 0.998964 0.000191 0.000179 0.000165 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003163_00426.