Species | Clostridium_G cochlearium | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_G; Clostridium_G cochlearium | |||||||||||
CAZyme ID | MGYG000003139_01616 | |||||||||||
CAZy Family | GH39 | |||||||||||
CAZyme Description | HTH-type transcriptional activator RhaS | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 42715; End: 44793 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH39 | 480 | 640 | 1.4e-17 | 0.35498839907192575 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG2207 | AraC | 2.03e-22 | 155 | 276 | 2 | 123 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
smart00342 | HTH_ARAC | 5.69e-20 | 189 | 272 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
pfam12833 | HTH_18 | 1.57e-17 | 195 | 274 | 1 | 81 | Helix-turn-helix domain. |
COG4753 | YesN | 4.74e-13 | 1 | 276 | 190 | 475 | Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains [Signal transduction mechanisms, Transcription]. |
COG3664 | XynB | 9.73e-11 | 528 | 657 | 273 | 396 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QLY81077.1 | 0.0 | 1 | 692 | 1 | 693 |
QXE20743.1 | 1.52e-312 | 1 | 687 | 1 | 688 |
AZV56511.1 | 2.89e-310 | 1 | 687 | 1 | 688 |
QAT40622.1 | 1.66e-309 | 1 | 686 | 1 | 687 |
ATD56640.1 | 4.36e-305 | 1 | 685 | 1 | 686 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6SWI_A | 1.40e-10 | 177 | 281 | 9 | 114 | TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
4M29_A | 4.66e-07 | 523 | 649 | 334 | 460 | Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15] |
4EKJ_A | 8.11e-07 | 523 | 649 | 334 | 460 | ChainA, Beta-xylosidase [Caulobacter vibrioides] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8NYT6 | 4.02e-11 | 30 | 657 | 21 | 712 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
Q6GD21 | 4.02e-11 | 30 | 657 | 21 | 712 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
Q6GKK1 | 9.19e-11 | 30 | 686 | 21 | 741 | Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1 |
Q7A882 | 2.76e-10 | 30 | 657 | 21 | 712 | Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1 |
Q99XB1 | 2.76e-10 | 30 | 657 | 21 | 712 | Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000041 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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