Species | Barnesiella sp900538555 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538555 | |||||||||||
CAZyme ID | MGYG000003099_01306 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 83249; End: 84841 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 82 | 484 | 2.7e-80 | 0.9323076923076923 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 4.10e-85 | 49 | 494 | 76 | 497 | Polygalacturonase [Carbohydrate transport and metabolism]. |
PLN02218 | PLN02218 | 2.92e-20 | 52 | 474 | 65 | 408 | polygalacturonase ADPG |
PLN02793 | PLN02793 | 2.11e-17 | 39 | 445 | 37 | 392 | Probable polygalacturonase |
pfam00295 | Glyco_hydro_28 | 9.90e-17 | 236 | 496 | 85 | 304 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN03003 | PLN03003 | 3.06e-16 | 58 | 410 | 26 | 303 | Probable polygalacturonase At3g15720 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QUT42084.1 | 4.57e-213 | 20 | 522 | 14 | 519 |
QUU07691.1 | 4.74e-213 | 3 | 515 | 6 | 523 |
QUT45779.1 | 5.45e-213 | 4 | 515 | 6 | 517 |
QUT69885.1 | 5.84e-213 | 20 | 522 | 21 | 526 |
ASM65773.1 | 1.35e-212 | 3 | 515 | 6 | 523 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 1.71e-82 | 48 | 480 | 20 | 417 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 1.82e-62 | 40 | 476 | 29 | 427 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 1.50e-35 | 40 | 518 | 145 | 606 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
1BHE_A | 4.76e-14 | 46 | 484 | 6 | 371 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
4MXN_A | 4.25e-13 | 56 | 304 | 22 | 214 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 7.44e-37 | 60 | 474 | 67 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 5.75e-35 | 58 | 518 | 154 | 600 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P27644 | 1.46e-29 | 242 | 462 | 28 | 248 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
Q8RY29 | 2.93e-22 | 47 | 474 | 60 | 408 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
Q02096 | 4.23e-18 | 23 | 408 | 32 | 369 | Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000113 | 0.047300 | 0.952554 | 0.000030 | 0.000034 | 0.000023 |
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