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CAZyme Information: MGYG000003099_00245

You are here: Home > Sequence: MGYG000003099_00245

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Barnesiella sp900538555
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538555
CAZyme ID MGYG000003099_00245
CAZy Family GH27
CAZyme Description Isomalto-dextranase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
461 MGYG000003099_2|CGC1 52768.26 4.7598
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003099 3270064 MAG Spain Europe
Gene Location Start: 16876;  End: 18261  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003099_00245.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 176 419 1.8e-30 0.9432314410480349

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17801 Melibiase_C 1.25e-18 368 439 7 74
Alpha galactosidase C-terminal beta sandwich domain. This domain is found at the C-terminus of alpha galactosidase enzymes.
PLN02808 PLN02808 8.89e-09 109 440 104 384
alpha-galactosidase
PLN02692 PLN02692 2.65e-07 35 436 57 405
alpha-galactosidase
cd14792 GH27 4.99e-06 63 347 28 269
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
PLN02229 PLN02229 9.14e-05 340 440 316 418
alpha-galactosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUR46778.1 2.87e-263 74 461 1 388
ALJ61711.1 2.84e-197 2 456 1 458
QUT92727.1 2.31e-196 2 456 1 458
QDM09865.1 2.51e-169 12 461 8 465
ALJ47291.1 7.16e-169 12 461 8 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5AWO_A 3.43e-123 21 442 24 468
Arthrobacterglobiformis T6 isomalto-dextranse [Arthrobacter globiformis],5AWP_A Arthrobacter globiformis T6 isomalto-dextranase complexed with isomaltose [Arthrobacter globiformis],5AWQ_A Arthrobacter globiformis T6 isomalto-dextranse complexed with panose [Arthrobacter globiformis]
6F4C_B 1.39e-07 38 440 13 361
Nicotianabenthamiana alpha-galactosidase [Nicotiana benthamiana]
3A5V_A 2.59e-06 306 438 250 389
Crystalstructure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q44052 4.06e-123 21 442 50 494
Isomalto-dextranase OS=Arthrobacter globiformis OX=1665 GN=imd PE=1 SV=1
P14749 1.16e-06 313 440 282 408
Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000204 0.999191 0.000168 0.000151 0.000143 0.000131

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003099_00245.