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CAZyme Information: MGYG000003097_02233

You are here: Home > Sequence: MGYG000003097_02233

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000436795
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000436795
CAZyme ID MGYG000003097_02233
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000003097_26|CGC2 63972.17 7.7871
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003097 3921942 MAG Spain Europe
Gene Location Start: 25667;  End: 27391  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003097_02233.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 271 546 1.7e-101 0.9548611111111112
CE12 26 254 7.4e-78 0.9904761904761905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 2.15e-86 25 255 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 6.92e-79 273 548 9 289
pectinesterase
pfam01095 Pectinesterase 3.33e-73 270 556 1 298
Pectinesterase.
PLN02682 PLN02682 1.05e-72 269 546 69 352
pectinesterase family protein
PLN02432 PLN02432 3.29e-68 273 546 15 277
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37158.1 0.0 1 574 1 574
AII65135.1 0.0 3 574 2 575
AII67884.1 0.0 3 574 2 575
QJR56762.1 0.0 3 574 2 575
QJR66992.1 0.0 3 574 2 575

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 3.12e-47 272 537 10 281
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.29e-39 272 537 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
2NSP_A 1.67e-39 269 561 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1QJV_A 4.96e-36 269 561 4 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
2NTB_A 1.77e-35 269 561 4 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 3.50e-57 273 546 9 287
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 3.14e-51 275 546 90 366
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
O23038 7.73e-50 257 543 78 370
Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2
Q9FM79 5.66e-49 272 556 83 375
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q9LXD9 7.14e-49 270 557 240 545
Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana OX=3702 GN=PME51 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.045288 0.642832 0.310841 0.000306 0.000318 0.000386

TMHMM  Annotations      download full data without filtering help

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