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CAZyme Information: MGYG000003035_00545

You are here: Home > Sequence: MGYG000003035_00545

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900542185
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900542185
CAZyme ID MGYG000003035_00545
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 MGYG000003035_6|CGC4 51909.77 5.0203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003035 3548444 MAG Netherlands Europe
Gene Location Start: 97325;  End: 98740  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003035_00545.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 185 454 5.8e-45 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.76e-18 153 448 115 477
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 1.34e-06 197 405 143 354
polygalacturonase
pfam00295 Glyco_hydro_28 8.49e-05 214 418 88 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 1.12e-04 214 291 180 258
Probable polygalacturonase
PLN03003 PLN03003 0.002 179 287 113 215
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR16514.1 1.59e-216 7 471 2 465
ANU58578.2 1.67e-216 4 471 10 476
ANW95387.1 3.02e-65 34 468 45 498
ASV74723.1 3.26e-63 23 453 25 438
SCM55434.1 2.62e-62 1 462 1 467

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000009 0.007876 0.992157 0.000003 0.000004 0.000003

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003035_00545.