CAZyme Information: MGYG000003030_00023

Basic Information

• Species: Collinsella sp900549455
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900549455
• CAZyme ID: MGYG000003030_00023
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
855	MGYG000003030_1|CGC2	93377.56	4.4399

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003030	1908924	MAG	Netherlands	Europe

• Gene Location: Start: 25719; End: 28286 Strand: -

Full Sequence      

MAACDNHVLPFLWLKGEAHETITEYLEQIAGADIREVCLESRTHPEFCRDGWWADLRFII
GECKRLGLKIWLLDDAHFPTGYANGALAGEDVDPALKKTVLKHRTVTVVGPQPSTVIKLG
NLMDPTERFVGAATFDAAGAPLDFELSVEQADGTPARLRFDAPAGITTVELFVTSQKTGF
RDEYINMVDADSCRALIDAVYEPTFEHLGDEFGCTILGFFTDEPGFMNEKGTALDDASTS
SFIGRGDMALPWSDELASRLRNALGEDWLTKLHGLWTREADGARVRHTYMDIATQLYRTC
FDEQIGDWCREHGVMHIGHVIEDKSCHTRLGQGAGHYFRAVAGQDMAGIDVVINQLAPGI
DHGPYSYFHGAWNIEFFTYALAKLGSSAARLDPKKQGRCMAEVFGAFGWHEGLRGMKWIA
DHMLVRGVNWFTPHAFSMAPFPDWDCPPHFYAHGNNPQWPHFGQLMSYMNRTATLLSGGC
ATRPVAILYHADAEWAGSAMPIERVAAELTRAQIDFDFVPAEAFEDKSRYEVSIADGLLC
VNNCRYQAFVMPGATFIGAETAQAVRRMIDAGVMVLAVDEVPSALYDADVVVELGELAAT
QLADMAGVLASAGLQTVVTDTPQPWLRALRYERAGETYVMLVNEHPRERIDCTVALATGE
RLCGTRLDLLNGIEPVAFDGALELAPFESCFVVLEAGSEDAPGDGAIDADASLDLRIEGP
WTVALSPAGSNGAFGEAQELEHLCDLTTDLFTGTCGTYRYHASFELANDLADATIDLGDV
YEVATLTLDGHPLGTRICPPYRFVINPLAAGTHELTVDVINTLDHAIPDIFALTEPVAPS
GILGPVTLCGQNLPK

Enzyme Prediction     

No EC number prediction in MGYG000003030_00023.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	19	848	3.6e-63	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	8.48e-04	401	622	579	796	alpha-L-rhamnosidase.
cd03143	A4_beta-galactosidase_middle_domain	0.008	485	577	1	85	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP54541.1	0.0	1	855	1	855
AZH68834.1	0.0	5	850	14	863
QNM10672.1	1.79e-291	5	848	14	832
AGF57028.1	4.31e-240	5	848	13	845
AZS14314.1	1.00e-189	6	848	14	872

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000081	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003030_00023.