CAZyme Information: MGYG000003019_01055

Basic Information

• Species: Alistipes sp900553175
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900553175
• CAZyme ID: MGYG000003019_01055
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1168	MGYG000003019_32|CGC1	125888.05	4.0687

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003019	1454145	MAG	China	Asia

• Gene Location: Start: 10016; End: 13522 Strand: -

Full Sequence      

MNPRIMNTIFLAMLASLSTLGSCTDVEDRLGPADFPTKGADGVAYYLDSKSGDDSNDGLS
AETAWRSLERVEKVYLQAGNSILLRRGSSWQGQLAPRGQGTQSQPIVIGAYGEGALPLIE
GCGKVDAAVKLTNQSYWVIENLEVTNAAPARDAYRCGIMVENNGGATVSGITIRNNKVHD
VTGSFSYSGDYHPHQFGGISCTTMSVTAGEEKFDNVLIEGNEVERVGRTGIVVWDFVWGS
NTQSSTNVVIRGNTVRETDSDGILTYGCNGSLIEYNLADGCGSWREDGGFNGAAAIWCTR
GKNCVIQFNEACNTRALEGNDDGTGFDIDLDSTDCIVQYNYSHDNAGGFMLIIDAHKEQG
SGSKGSIVRYNISQNDRKRLFMVAGGVTPGMQIYNNTLYVGEGLDTKLMDHTWDNAGDLD
AAWSFRNNLICNFGSGEWVVPGSQGQFTGNIYWGNHPASEPDEADKMTFDPMLAAPGTGG
SGLASLDGYKLQEASPAVNAGVQVASNGGRDFWGNPVSRRGQATVGACEPNGEVQLGGYL
WDPIDDWSQVYFHSDNLNLDSSNPHFFDTDASRAVRQDKNDGVLVYRLDNLKSAMVTAYF
GVWYGVTSIDVIRMEVSATGREDDYAPVAVRGGSAGDVAEGWQKYEIHINETLPDGMNFL
KVSMVDTFNEAWAIQLGEVEISDEPAEVILPSDNTFTEPFDNLGNLAFSSGDNLIVAWSS
EEDIAAFFDGDAGRVARSNGNEAVMAWQYAGVADFALTAYLCGDPGDDFGFLQVLGTAAA
DPSTLTAIPVEFTLAATRGDWREYRITPSGDMPQGYNFLAIRLPQTAHAPGGWELQLGEL
KISDRKLSEEPVTPVDPAAFNDPLDNLDKLTFSSGDNLIIAWSSEEDIAAYFDGDAGRLA
RSNGNEAVVAWQYAGVADFAVTAFFCGDPGQDEFLQVLGTAAADPSTLTAIPVRFSLVAT
RGDWREYRITPSGDVPQGYNFLAIRLPQSPLAPQGWELQIADVRIADRKFSQTPDTPGPT
QTITDELGDMSHLFAKSDNVVTDWGNEANFKGDGARATRNSSAAGFIAYACPGLSDFDIT
AFFSVYIDNSYLKVYAASSDDFSDRVEIPCTFTEISAVPDAFTGYSVTPAGAIPENCGYL
YIEMLQIPVEGNGWTTQIGTVKITCAAE

Enzyme Prediction     

No EC number prediction in MGYG000003019_01055.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	44	529	3e-131	0.9918533604887984

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	2.27e-08	214	397	9	157	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	9.72e-08	127	284	1	116	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	0.006	129	283	22	154	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCA49028.1	1.22e-266	7	682	5	676
BCA49029.1	4.64e-197	42	527	28	508
QTH41501.1	3.73e-168	45	553	330	841
AWV33845.1	4.04e-160	17	552	304	838
BBH22310.1	9.33e-160	45	552	328	837

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	5.36e-47	42	529	8	576	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A	4.34e-39	37	529	12	596	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
6KQT_A	1.36e-32	27	399	226	638	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	1.81e-32	27	399	226	638	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000044	1.000025	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003019_01055.