CAZyme Information: MGYG000003006_01327

Basic Information

• Species: Collinsella sp900551365
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900551365
• CAZyme ID: MGYG000003006_01327
• CAZy Family: GH140
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
385	MGYG000003006_148|CGC1	43090.32	4.4686

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003006	1700612	MAG	United States	North America

• Gene Location: Start: 2416; End: 3573 Strand: -

Full Sequence      

MVDLRAKQGFTVYQTNLRSDMGAGDRYWIDGGMAKGVEDVPNVAFYQRELDRRMAYIADA
GLVNALGQAWAFAILGEHAVEHQKHLARYLVARYGAYPMVWTLAGEVAGYRKEGRAAMID
GWREVALEIEARDGYGHLATAHYTNERPFADYYQDEPWMDFTLNQAGHGDYIIKASDYFD
YLAAHDDKPFVEGEALYEFCSTLEEMGTRLCTADMLRRVAYICMQAGGAGYTYGAQGIWD
NVWESPEELDPFMAIFNRFGITWAQAVDGEGAVQMGYMRSFYEDNHFWELAPYETTDAGN
LFANKAPLATANQDLSRIVAYFGDTVRQKLAIEGVPTGAAYASRWFNPRTGAYRDGEDAL
AVTGSIILPDKPGVGDWLLVLELKA

Enzyme Prediction     

No EC number prediction in MGYG000003006_01327.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH140	2	358	7.2e-67	0.8519417475728155

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13204	DUF4038	5.37e-54	1	283	35	318	Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP54502.1	6.07e-273	1	385	156	540
AQR97270.1	2.24e-149	1	382	153	532
QUC02871.1	1.03e-114	1	381	1	384
QTH41603.1	1.68e-62	1	382	186	556
QNK57358.1	2.49e-38	42	379	370	688

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MSY_A	7.23e-16	7	351	63	413	Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
3KZS_A	3.18e-14	7	323	63	388	Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A	7.91e-11	77	351	147	429	ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000043	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003006_01327.