logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002997_00020

You are here: Home > Sequence: MGYG000002997_00020

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lactococcus_A piscium_C
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus_A; Lactococcus_A piscium_C
CAZyme ID MGYG000002997_00020
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
564 MGYG000002997_1|CGC1 66453.52 6.2454
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002997 1565244 MAG United States North America
Gene Location Start: 19843;  End: 21537  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002997_00020.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05045 RgpF 0.0 35 509 1 501
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.
COG3754 RgpF 3.60e-170 2 553 1 576
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQF25488.1 2.17e-223 4 553 3 563
QAU29220.1 4.36e-223 4 553 3 563
QBS00150.1 4.36e-223 4 553 3 563
QBS00320.1 8.76e-223 3 553 2 563
QBS00422.1 8.76e-223 3 553 2 563

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
F7YJG6 1.42e-06 35 250 63 281
Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2
P0DJH1 1.42e-06 35 250 63 281
Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002997_00020.