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CAZyme Information: MGYG000002922_00941

You are here: Home > Sequence: MGYG000002922_00941

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900541925
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900541925
CAZyme ID MGYG000002922_00941
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
542 MGYG000002922_7|CGC3 61692 5.2716
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002922 2264361 MAG United States North America
Gene Location Start: 65237;  End: 66865  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 123 406 8.1e-126 0.9963636363636363

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02474 pec_lyase 1.86e-21 123 388 1 267
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492 Pec_lyase 1.04e-19 123 387 1 265
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABR39489.1 1.62e-278 26 539 24 537
QQY38319.1 1.62e-278 26 539 24 537
QUT59611.1 1.62e-278 26 539 24 537
QQY41697.1 1.62e-278 26 539 24 537
QEW38150.1 1.62e-278 26 539 24 537

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 3.40e-15 107 318 78 303
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.87e-10 116 388 37 300
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.88e-09 116 388 37 300
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003493 0.977638 0.017880 0.000346 0.000309 0.000293

TMHMM  Annotations      download full data without filtering help

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