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CAZyme Information: MGYG000002922_00940

You are here: Home > Sequence: MGYG000002922_00940

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900541925
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900541925
CAZyme ID MGYG000002922_00940
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
938 MGYG000002922_7|CGC3 103144.14 5.7136
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002922 2264361 MAG United States North America
Gene Location Start: 62420;  End: 65236  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002922_00940.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 631 924 2.7e-97 0.9861111111111112
CE12 406 615 7.1e-71 0.9904761904761905
PL1 176 331 2.4e-40 0.7128712871287128

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 8.86e-73 405 615 2 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
pfam01095 Pectinesterase 5.62e-71 630 922 1 293
Pectinesterase.
PLN02773 PLN02773 2.82e-69 633 916 9 288
pectinesterase
PLN02432 PLN02432 1.59e-68 633 916 15 278
putative pectinesterase
PLN02682 PLN02682 1.29e-65 629 915 69 352
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37158.1 4.84e-167 404 937 25 564
QUT45771.1 1.53e-166 404 937 25 579
QRQ48636.1 2.15e-166 404 937 25 579
ALJ61265.1 6.70e-165 404 937 25 579
QUT93206.1 6.70e-165 404 937 25 579

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 6.94e-41 632 932 6 303
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 3.37e-40 632 932 10 307
Pectinmethylesterase from Carrot [Daucus carota]
5C1E_A 6.44e-32 639 903 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 2.95e-31 639 903 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2NSP_A 7.42e-31 629 934 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 2.67e-54 633 927 9 298
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9SIJ9 2.67e-51 633 915 53 317
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
Q9FM79 1.23e-49 575 925 36 373
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q8VYZ3 1.87e-47 635 915 90 366
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9ZQA3 1.53e-46 633 918 93 373
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001011 0.983071 0.015164 0.000263 0.000241 0.000211

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002922_00940.