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CAZyme Information: MGYG000002877_01535

You are here: Home > Sequence: MGYG000002877_01535

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900550365
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900550365
CAZyme ID MGYG000002877_01535
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
589 MGYG000002877_25|CGC1 64924.31 4.5517
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002877 2502849 MAG United States North America
Gene Location Start: 10125;  End: 11894  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002877_01535.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 282 9.1e-72 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.31e-06 38 255 49 276
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 5.68e-04 68 236 1 169
Amb_all domain.
pfam18884 TSP3_bac 0.005 467 488 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 1.23e-252 22 589 2 586
QCD40778.1 3.11e-224 13 589 8 598
QCP73827.1 3.11e-224 13 589 8 598
VEH16322.1 7.92e-224 5 566 10 551
AGB28243.1 1.75e-221 3 535 4 527

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.23e-46 26 513 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 3.01e-44 26 513 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 7.14e-42 26 513 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.38e-41 8 513 3 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 1.38e-41 8 513 3 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000407 0.998676 0.000239 0.000246 0.000220 0.000188

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002877_01535.