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CAZyme Information: MGYG000002850_01234

You are here: Home > Sequence: MGYG000002850_01234

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900544465
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900544465
CAZyme ID MGYG000002850_01234
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000002850_111|CGC1 79370.25 4.9526
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002850 1884856 MAG United States North America
Gene Location Start: 4104;  End: 6269  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002850_01234.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 329 5.9e-77 0.9826388888888888
CE19 463 698 6.6e-26 0.5783132530120482

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 9.83e-62 6 314 81 388
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 1.67e-50 16 311 10 275
Pectinesterase.
PLN02708 PLN02708 5.32e-42 10 336 245 550
Probable pectinesterase/pectinesterase inhibitor
PLN02432 PLN02432 5.06e-41 1 334 7 291
putative pectinesterase
PLN02773 PLN02773 5.68e-41 8 314 7 282
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 1 719 1 719
ATP54718.1 0.0 1 721 1 721
QUC03567.1 0.0 8 712 7 706
QRP39805.1 1.81e-96 8 336 18 349
ASN95501.1 1.81e-96 8 336 18 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 3.17e-28 10 331 7 301
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 2.44e-24 18 256 44 269
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.22e-23 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 2.22e-23 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 4.29e-23 16 331 17 305
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 1.43e-33 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
O81320 6.50e-30 10 328 167 453
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
Q8L7Q7 2.88e-29 18 324 301 593
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2
O04887 3.19e-29 10 310 205 472
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q9LVQ0 3.33e-29 8 314 7 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002850_01234.