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CAZyme Information: MGYG000002836_02632

You are here: Home > Sequence: MGYG000002836_02632

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerocolumna aminovalerica
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Anaerocolumna; Anaerocolumna aminovalerica
CAZyme ID MGYG000002836_02632
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 52099.39 4.7468
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002836 4582914 MAG United States North America
Gene Location Start: 61481;  End: 62875  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002836_02632.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 250 453 6.3e-52 0.8008658008658008

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 3.54e-62 242 456 24 224
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 2.32e-39 254 448 40 225
Chitinase class I.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX42311.1 4.36e-317 1 464 1 464
AJS59770.1 1.91e-96 114 462 203 549
SYX81768.1 1.15e-90 114 462 201 547
AZS17953.1 4.21e-90 114 462 42 388
QTH45557.1 9.93e-83 98 462 47 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V91_A 8.22e-36 251 441 41 222
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]
7V92_A 4.22e-34 251 423 41 206
ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa]
1DXJ_A 7.53e-34 218 441 6 220
Structureof the chitinase from jack bean [Canavalia ensiformis]
6LNR_A 1.30e-33 253 462 95 292
Structureof intact chitinase with hevein domain from the plant Simarouba glauca, known for its traditional anti-inflammatory efficacy [Simarouba glauca]
3CQL_A 5.49e-33 251 441 41 222
CrystalStructure of GH family 19 chitinase from Carica papaya [Carica papaya],3CQL_B Crystal Structure of GH family 19 chitinase from Carica papaya [Carica papaya]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q688M5 5.15e-35 244 441 118 306
Chitinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht9 PE=2 SV=1
Q42993 3.96e-34 251 448 118 308
Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1
P93680 4.09e-33 251 462 114 315
Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2
P24626 6.90e-33 251 448 115 304
Chitinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht3 PE=2 SV=2
P52405 9.14e-33 251 441 108 289
Endochitinase 3 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB3 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000305 0.998920 0.000210 0.000190 0.000181 0.000172

TMHMM  Annotations      download full data without filtering help

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