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CAZyme Information: MGYG000002827_01108

You are here: Home > Sequence: MGYG000002827_01108

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phyllobacterium sp900539805
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales_A; Rhizobiaceae_A; Phyllobacterium; Phyllobacterium sp900539805
CAZyme ID MGYG000002827_01108
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
341 MGYG000002827_6|CGC1 36823.11 5.1126
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002827 5102924 MAG Singapore Asia
Gene Location Start: 30971;  End: 31996  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002827_01108.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 65 283 1.2e-37 0.9351851851851852

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 1.44e-69 6 301 5 297
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337 PRK05337 4.03e-53 18 283 13 278
beta-hexosaminidase; Provisional
pfam00933 Glyco_hydro_3 7.86e-48 33 283 34 283
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND50521.1 2.56e-228 1 341 1 341
ATU90410.1 2.00e-209 1 341 1 341
ANL49579.1 6.16e-206 3 341 2 340
ANL19665.1 8.74e-206 3 341 2 340
ANK89413.1 8.74e-206 3 341 2 340

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4GVF_A 1.17e-34 33 283 28 277
Crystalstructure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVF_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
6K5J_A 3.29e-34 4 286 19 300
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3TEV_A 4.58e-34 9 281 22 289
Thecrystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1],3TEV_B The crystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1]
4GVI_A 6.14e-34 33 283 28 277
Crystalstructure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVI_B Crystal structure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
4G6C_A 1.17e-31 6 341 11 344
Crystalstructure of beta-hexosaminidase 1 from Burkholderia cenocepacia J2315 [Burkholderia cenocepacia J2315],4G6C_B Crystal structure of beta-hexosaminidase 1 from Burkholderia cenocepacia J2315 [Burkholderia cenocepacia J2315]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B5F8E5 5.49e-34 33 283 28 277
Beta-hexosaminidase OS=Salmonella agona (strain SL483) OX=454166 GN=nagZ PE=3 SV=1
B5RB93 5.49e-34 33 283 28 277
Beta-hexosaminidase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=nagZ PE=3 SV=1
B5FK98 5.49e-34 33 283 28 277
Beta-hexosaminidase OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=nagZ PE=3 SV=1
Q57QE6 5.49e-34 33 283 28 277
Beta-hexosaminidase OS=Salmonella choleraesuis (strain SC-B67) OX=321314 GN=nagZ PE=3 SV=1
B4TTH9 5.49e-34 33 283 28 277
Beta-hexosaminidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002827_01108.