Species | Collinsella sp900545165 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900545165 | |||||||||||
CAZyme ID | MGYG000002734_00174 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 4802; End: 6397 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 105 | 478 | 2e-66 | 0.9261538461538461 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 3.40e-95 | 82 | 526 | 84 | 529 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 5.66e-23 | 188 | 414 | 48 | 255 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN03010 | PLN03010 | 5.01e-22 | 82 | 482 | 48 | 384 | polygalacturonase |
PLN02218 | PLN02218 | 7.03e-22 | 73 | 417 | 60 | 363 | polygalacturonase ADPG |
PLN03003 | PLN03003 | 3.53e-21 | 174 | 428 | 97 | 318 | Probable polygalacturonase At3g15720 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QIA34431.1 | 0.0 | 1 | 531 | 1 | 531 |
ATP54717.1 | 0.0 | 1 | 531 | 1 | 531 |
QUC03565.1 | 1.73e-280 | 1 | 530 | 1 | 529 |
QOL31033.1 | 1.27e-234 | 1 | 528 | 1 | 526 |
QOL34309.1 | 2.55e-234 | 1 | 528 | 1 | 526 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 1.84e-37 | 65 | 380 | 11 | 335 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 7.55e-30 | 83 | 380 | 47 | 344 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 2.44e-25 | 74 | 422 | 150 | 514 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P27644 | 6.40e-58 | 236 | 506 | 23 | 295 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
A7PZL3 | 1.37e-33 | 85 | 523 | 67 | 481 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 9.50e-26 | 43 | 422 | 124 | 507 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P48978 | 9.37e-21 | 71 | 427 | 88 | 400 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
P49063 | 4.83e-20 | 81 | 408 | 70 | 353 | Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000042 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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