logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002721_00585

You are here: Home > Sequence: MGYG000002721_00585

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-873 sp009775195
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-873; CAG-873 sp009775195
CAZyme ID MGYG000002721_00585
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 MGYG000002721_4|CGC1 46826.03 6.7223
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002721 3174810 MAG Canada North America
Gene Location Start: 66456;  End: 67718  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002721_00585.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 76 416 1.7e-53 0.916923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.18e-38 48 414 83 470
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.88e-11 133 383 42 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02188 PLN02188 6.98e-11 50 363 39 325
polygalacturonase/glycoside hydrolase family protein
PLN03003 PLN03003 1.18e-07 144 403 112 342
Probable polygalacturonase At3g15720
PLN03010 PLN03010 1.66e-06 45 388 44 347
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40899.1 2.27e-189 2 420 6 425
QCP73439.1 1.56e-188 9 412 10 415
QCD39791.1 1.56e-188 9 412 10 415
BCS85374.1 2.67e-170 21 412 26 416
QJR62619.1 2.41e-156 3 415 2 411

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 3.21e-23 46 392 43 405
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 8.17e-19 40 392 20 388
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4C2L_A 6.99e-07 58 266 25 216
Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.75e-15 52 272 67 283
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P26216 8.04e-12 45 344 38 315
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1
P35338 1.43e-11 45 344 38 315
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P35339 1.43e-11 45 344 38 315
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
Q949Z1 5.12e-09 24 383 56 396
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000794 0.703888 0.294495 0.000269 0.000281 0.000245

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002721_00585.