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CAZyme Information: MGYG000002587_03134
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parabacteroides sp900760525 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900760525 | |||||||||||
| CAZyme ID | MGYG000002587_03134 | |||||||||||
| CAZy Family | GH30 | |||||||||||
| CAZyme Description | Glucuronoxylanase XynC | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5069; End: 6535 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH30 | 38 | 482 | 2.9e-160 | 0.9933333333333333 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5520 | XynC | 6.15e-30 | 10 | 436 | 10 | 375 | O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| pfam14587 | Glyco_hydr_30_2 | 4.50e-15 | 37 | 370 | 3 | 366 | O-Glycosyl hydrolase family 30. |
| pfam02055 | Glyco_hydro_30 | 4.25e-10 | 49 | 232 | 1 | 190 | Glycosyl hydrolase family 30 TIM-barrel domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQT78450.1 | 6.86e-173 | 31 | 488 | 27 | 491 |
| QRP59665.1 | 6.86e-173 | 31 | 488 | 27 | 491 |
| ASM65029.1 | 6.86e-173 | 31 | 488 | 27 | 491 |
| QQY39420.1 | 1.10e-135 | 40 | 487 | 46 | 498 |
| QQY42684.1 | 1.10e-135 | 40 | 487 | 46 | 498 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7O0E_A | 5.60e-20 | 47 | 431 | 14 | 386 | ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464] |
| 5CXP_A | 6.23e-20 | 35 | 482 | 5 | 384 | X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824] |
| 7NCX_AAA | 2.83e-19 | 27 | 431 | 1 | 393 | ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464] |
| 6M5Z_A | 1.06e-18 | 47 | 482 | 34 | 450 | ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612] |
| 4FMV_A | 2.39e-17 | 35 | 485 | 4 | 386 | CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| G2Q1N4 | 6.14e-20 | 47 | 431 | 38 | 410 | GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1 |
| Q45070 | 9.03e-15 | 147 | 482 | 111 | 417 | Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1 |
| G5ECR8 | 3.93e-13 | 29 | 428 | 84 | 483 | Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1 |
| Q6YK37 | 5.09e-13 | 147 | 462 | 112 | 393 | Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2 |
| Q9UB00 | 1.47e-10 | 37 | 431 | 87 | 483 | Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.004252 | 0.977353 | 0.017630 | 0.000280 | 0.000234 | 0.000216 |