CAZyme Information: MGYG000002587_01996

Basic Information

• Species: Parabacteroides sp900760525
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900760525
• CAZyme ID: MGYG000002587_01996
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
985	MGYG000002587_36|CGC1	110310.25	5.6132

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002587	4423098	MAG	China	Asia

• Gene Location: Start: 26157; End: 29114 Strand: -

Full Sequence      

MSWKTICWEAILLGFLFSCAGSDNQPVDRNLQIDYDYLKSNFQQPDKTYGVNCWWWWLNG
NVTKEAITKDLEAMRSRNFQGAMIFDAGGHNQRGNKDIPAGPLFGSKEWTDLFVFALDEA
KRLGLEIGFNIQSGWNLGGPCVTPQYAAKQLTYSEQKATGGKTLRLQLAEPEIHKGFYKD
IVVLAFPANKENKTDEPVSNLDLKLGFHELGGSAPDCRFLLENSLYGREKKQDKTICLVD
KARIVDLTGKMDEKGLLSWDAPAGDWNIMRIGYTCTRSEVSTSSRDWQGNVLDYMDRNAF
DYYWNTVVEPILQAAGEKHVGSTLKFMETDSWECGGMNWTDAFADEFRSYCGYDLKLYLP
LIAGHVVDNIDASNAFLADFRKTIGHLVATNHYARFAEHAHQHNMGIQPESAGPHAGPLD
GIKDYGFSDIVMSEFWSPSPHRPRPQDRFFIKQASSAAHIYGKKIVGAESFTTIGPHWND
ELWHDQKSAFDHEICAGLNRVYFHTFTCSPAEQGIPGQEYFAGTHVNPRVTWWSKSAPFI
DYMHRVQMLAQEGTFVADVLYYYGDHVPNVYPFKHSDMPGAMFGFDYDVTDENILMKSDV
ENGDIVVPGGRKYKVLVLPDHRILSLPVLEKLETLVKEGASVLGPKPQKAVSLAGGEKGV
AEFKQLADLLWGAATGTTGQNKYGKGLVSWGISAREYLLSRNQPVDFAVEGNDSKTDFDY
IHYVVGNTHVYFVSNQTAERQTVNARFRVSGLQPELWDALTGEIRDAGAFTQKEEKTLVP
LALEPYGSIFVVFHKVIDRNEQGVKACNDPDYEALQTLDGAWTVNFDPKWGGPTSVVFPE
LIDWTTHPDKGIKYYSGTAVYNKKFTANFEKNPANRYFLQLENVKDVGIASVRINGKDKG
VVWTKPFRVDITDGLKEGENDLVVEVTNSWFNRVAGDEISVGPAKYTQTNVVLGNDFRGN
AVSEITLEPSGLLGPVTVRVAVERK

Enzyme Prediction     

No EC number prediction in MGYG000002587_01996.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	240	978	4.2e-222	0.883495145631068

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	3.57e-171	54	768	12	870	alpha-L-rhamnosidase.
cd03143	A4_beta-galactosidase_middle_domain	0.002	604	695	43	135	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SCM58877.1	0.0	11	981	15	977
AWW28678.1	0.0	13	978	16	976
AQQ70075.1	0.0	38	980	32	959
ARK11122.1	0.0	40	976	32	951
ACU03164.1	0.0	4	984	2	960

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	3.08e-113	38	976	42	1136	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A	5.77e-106	38	985	31	1105	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	1.52e-105	38	985	31	1105	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	1.58e-146	29	984	21	1161	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001390	0.542270	0.455657	0.000295	0.000188	0.000183

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002587_01996.