CAZyme Information: MGYG000002561_00595

Basic Information

• Species: Bacteroides sp902388495
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902388495
• CAZyme ID: MGYG000002561_00595
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
798	MGYG000002561_3|CGC4	90741.5	8.8524

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002561	4554549	MAG	China	Asia

• Gene Location: Start: 185682; End: 188078 Strand: -

Full Sequence      

MNRIRISSIRRLRKTLFLLTLIIPFVLKAQMTDSTLTYRQWDAEWITVPQTSPSAYGVYF
FRKDFNISQVPSRFPIFVSGDNRYKLYVNEQLVSLGPARGDIEHWNYETVDIAPQLKAGR
NVIAAQIWNEGDQKAEAQFSFRTGFILQGAVEASAILNTNKSWNCIQDHSYSIPSLTERV
RGYSVVPPNEQIDMRSHIKGWQKLSYDDSSWTKAQPISRGTPKNTIGIDANKTWRLVSSA
IPQMELKYQRFGKVRKVENANVPASFPAQKGKISIPPYTTANILLDNIVLTNAFPTIDVK
GGKESIVTLTYGEALYDDKFAKGNRNETEGKRLVGKPDILISDGSNDQTFTSLSYRTFRY
VNIQVQTKEEPLIIDDFYSTFVGYPFILNAKLETENEEMQKIFEMGWRTARLCAVETYMD
CPYYEQLQYIGDSRIQALVSLYDSGDDRLVKSMLTNADNSRQPEGITLSRYPSVNPQIIP
TFSLWYIGMLHDYMMYGSDITFLKNRLPGERQILGYFQKFQDTDGSIKRLPNWAFIDWAF
GFNRGMGHVGKDGCSAMLDLQLLIAYQNAYDLEKTWGMNDYASLYQEKIAQLAKTIKSKY
WDDKKKLFSDTSEKDKFSQHTNSLAILSGLVNGKEAMEIGQLILADKELTPASIYFKYYV
HQALIKAGLGDDYLKWLDDWRRNIELGLTTLAETSNVERARSDCHAWGASPNIEFFRTLL
GIDSAAPMFGKVKIEPHLGNIKKIGGEMPHPSGKISVKYDNSGPKLKAEIILPDNTTGVF
IWKGTKRDIKPGINTIQL

Enzyme Prediction     

No EC number prediction in MGYG000002561_00595.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	282	779	2.2e-104	0.9781746031746031
CBM67	43	217	4.2e-44	0.9488636363636364

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08531	Bac_rhamnosid_N	3.51e-08	76	226	8	160	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	1.75e-05	294	363	19	84	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBE16528.1	0.0	12	798	1	783
AEI46911.1	6.35e-318	18	798	9	797
AXE20431.1	6.36e-318	18	798	10	796
QMU29042.1	2.61e-316	26	798	20	794
BBD44501.1	9.53e-315	41	798	29	783

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OKX_A	7.86e-37	209	775	381	934	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A	6.92e-24	283	768	194	685	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
6I60_A	1.82e-16	24	778	128	894	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.030395	0.966112	0.002565	0.000352	0.000271	0.000273

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002561_00595.