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CAZyme Information: MGYG000002552_01869
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp000436535 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000436535 | |||||||||||
| CAZyme ID | MGYG000002552_01869 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 73418; End: 74974 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 103 | 471 | 3.1e-78 | 0.9384615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.99e-92 | 5 | 511 | 5 | 542 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02188 | PLN02188 | 2.14e-30 | 81 | 479 | 36 | 390 | polygalacturonase/glycoside hydrolase family protein |
| pfam00295 | Glyco_hydro_28 | 1.33e-29 | 184 | 463 | 48 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 5.11e-26 | 81 | 459 | 67 | 408 | polygalacturonase ADPG |
| PLN02793 | PLN02793 | 3.26e-25 | 82 | 398 | 53 | 342 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACR72585.1 | 4.00e-310 | 1 | 515 | 1 | 515 |
| ABX43097.1 | 6.87e-236 | 1 | 518 | 1 | 518 |
| BCJ96409.1 | 3.81e-223 | 1 | 515 | 1 | 514 |
| VCV21973.1 | 2.01e-218 | 1 | 517 | 1 | 518 |
| CBL09361.1 | 2.01e-218 | 1 | 517 | 1 | 518 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 8.69e-39 | 82 | 469 | 28 | 417 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 5.98e-34 | 82 | 380 | 45 | 355 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 1.06e-28 | 36 | 433 | 96 | 536 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 1BHE_A | 1.28e-24 | 98 | 432 | 26 | 375 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 4MR0_A | 1.35e-09 | 76 | 243 | 110 | 283 | Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27644 | 5.49e-47 | 230 | 446 | 30 | 247 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| A7PZL3 | 1.04e-44 | 81 | 466 | 62 | 431 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P43212 | 6.39e-27 | 74 | 395 | 50 | 346 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
| P35336 | 2.57e-26 | 81 | 485 | 89 | 451 | Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1 |
| P15922 | 2.61e-26 | 50 | 457 | 114 | 578 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |