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CAZyme Information: MGYG000002549_03749

You are here: Home > Sequence: MGYG000002549_03749

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides caccae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae
CAZyme ID MGYG000002549_03749
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
674 MGYG000002549_18|CGC9 75419.63 4.6356
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002549 5479119 Isolate United States North America
Gene Location Start: 338341;  End: 340365  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002549_03749.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 215 469 3.7e-30 0.7261538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.73e-11 251 468 244 451
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.83e-05 251 455 91 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU07174.1 0.0 1 674 1 674
QMV67078.1 6.31e-64 49 670 44 663
AWW32777.1 2.30e-52 45 437 24 426
SDS06655.1 1.36e-50 49 409 40 404
QNK57052.1 1.82e-50 99 670 77 647

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000051 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002549_03749.