CAZyme Information: MGYG000002549_00220

Basic Information

• Species: Bacteroides caccae
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae
• CAZyme ID: MGYG000002549_00220
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
538	MGYG000002549_1|CGC4	59060.78	4.8918

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002549	5479119	Isolate	United States	North America

• Gene Location: Start: 273046; End: 274662 Strand: +

Full Sequence      

MKGLIKGQLVIWAYKENILGIILSAFLFGGVVACSDEQATEKQLTDESGLPEYPIPDRTT
IVAFPGAYGAGKYTTGGAGGTVYIVTSLADDGAVGTLRHAIQQKGRRTIVFAVGGVIELQ
KQLVITNDDITIAGQTAPGKGICLKDNTLRVNANNVIIRFLRCRMGDEKRIEDDAMNGYQ
NNYPGKQNIIIDHCSMSWSTDECASFYGNTNFTMQWCILSESLWHSIHEKEAHGYGGIWG
GSPATFHHNLLAHHSNRTPRLCGSRYSNRADVEKVDLCNNVIYNWTNEGAYGAQGGYYNI
MNNYYKLGPASAKDKTHARFFTAYIDDGKNAQDAGVFGYFYVNGNIMDNTCVDLSGEQQK
EIASANANNISSTAFKVKNDERTSSDLLLDMRIDILSDYSFMQSATDAYETVLAYAGAWT
CGWKDNEYIIPERDKIDRRIVSETANGTYSTNASKGGGYGLIDSQVDTIEKWDEYITATS
SLVDTDKDGIPDGWEIAKGLNPNDASDGAKYNLSAAYTNLEVYLNGLVENTFPASHPK

Enzyme Prediction     

No EC number prediction in MGYG000002549_00220.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	114	305	1.4e-76	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	3.82e-07	74	261	48	236	Pectate lyase [Carbohydrate transport and metabolism].
smart00656	Amb_all	9.03e-06	124	305	12	186	Amb_all domain.
pfam18884	TSP3_bac	0.001	484	505	1	22	Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUU07661.1	0.0	1	538	1	538
QQT77707.1	0.0	1	538	1	538
ASM65745.1	0.0	1	538	1	538
QRP57049.1	0.0	1	538	1	538
AAO79221.1	8.17e-246	15	536	2	523

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B0XMA2	1.74e-41	59	532	19	419	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
B8NQQ7	2.35e-41	59	532	18	418	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0	3.31e-41	59	532	19	419	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88	3.31e-41	59	532	19	419	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83	4.28e-40	59	532	18	418	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002044	0.138017	0.859606	0.000080	0.000150	0.000082

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002549_00220.