You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002534_00108
You are here: Home > Sequence: MGYG000002534_00108
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A farmeri | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A farmeri | |||||||||||
| CAZyme ID | MGYG000002534_00108 | |||||||||||
| CAZy Family | GT52 | |||||||||||
| CAZyme Description | CMP-N-acetylneuraminate:beta-galactoside alpha-2,3-sialyltransferase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 111567; End: 112508 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT52 | 26 | 293 | 8.8e-76 | 0.9885931558935361 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07922 | Glyco_transf_52 | 1.71e-22 | 84 | 292 | 58 | 269 | Glycosyltransferase family 52. This family features glycosyltransferases belonging to glycosyltransferase family 52, which have alpha-2,3- sialyltransferase (EC:4.2.99.4) and alpha-glucosyltransferase (EC 2.4.1.-) activity. For example, beta-galactoside alpha-2,3- sialyltransferase expressed by Neisseria meningitidis is a member of this family and is involved in a step of lipooligosaccharide biosynthesis requiring sialic acid transfer; these lipooligosaccharides are thought to be important in the process of pathogenesis. This family includes several bacterial lipooligosaccharide sialyltransferases similar to the Haemophilus ducreyi LST protein. Haemophilus ducreyi is the cause of the sexually transmitted disease chancroid and produces a lipooligosaccharide (LOS) containing a terminal sialyl N-acetyllactosamine trisaccharide. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AST77681.1 | 5.64e-227 | 1 | 313 | 1 | 313 |
| QPB32475.1 | 5.71e-195 | 1 | 313 | 1 | 313 |
| BCU46622.1 | 5.71e-195 | 1 | 313 | 1 | 313 |
| AMG52033.1 | 5.71e-195 | 1 | 313 | 1 | 313 |
| AMG92622.1 | 5.71e-195 | 1 | 313 | 1 | 313 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2YK7_A | 5.20e-10 | 3 | 298 | 4 | 298 | Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CMP-3F-Neu5Ac. [Neisseria meningitidis serogroup B] |
| 2YK5_A | 9.37e-10 | 3 | 298 | 4 | 298 | Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CMP. [Neisseria meningitidis serogroup B] |
| 2YK6_A | 9.37e-10 | 3 | 298 | 4 | 298 | Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CDP. [Neisseria meningitidis serogroup B] |
| 2YK4_A | 9.42e-10 | 3 | 298 | 5 | 299 | Structureof Neisseria LOS-specific sialyltransferase (NST). [Neisseria meningitidis serogroup B] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9CNC4 | 4.38e-30 | 3 | 311 | 3 | 306 | CMP-N-acetylneuraminate:beta-galactoside alpha-2,3-sialyltransferase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=lst PE=1 SV=1 |
| Q48211 | 2.87e-23 | 3 | 287 | 3 | 275 | N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=lsgB PE=3 SV=2 |
| P72074 | 7.80e-14 | 3 | 298 | 52 | 346 | N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria gonorrhoeae OX=485 GN=lst PE=3 SV=1 |
| P72097 | 1.92e-13 | 3 | 298 | 52 | 346 | N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lst PE=1 SV=1 |
| Q9JUV5 | 8.60e-13 | 3 | 298 | 52 | 346 | N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=lst PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999272 | 0.000756 | 0.000012 | 0.000002 | 0.000001 | 0.000003 |