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CAZyme Information: MGYG000002503_03086

You are here: Home > Sequence: MGYG000002503_03086

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterobacter ludwigii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter ludwigii
CAZyme ID MGYG000002503_03086
CAZy Family GH19
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
609 MGYG000002503_8|CGC1 66297.8 4.5289
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002503 4697885 Isolate Australia Oceania
Gene Location Start: 37764;  End: 39593  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002503_03086.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 82 339 1.1e-75 0.9956709956709957
CBM73 557 607 2.1e-24 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 8.87e-74 90 339 1 224
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 1.91e-39 106 334 25 229
Chitinase class I.
COG3979 COG3979 2.75e-32 72 224 43 181
Chitodextrinase [Carbohydrate transport and metabolism].
pfam18911 PKD_4 3.70e-12 445 525 6 80
PKD domain. This entry is composed of PKD domains found in bacterial surface proteins.
PRK13211 PRK13211 3.49e-11 561 609 424 477
N-acetylglucosamine-binding protein GbpA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCR92484.1 0.0 1 609 1 609
AKM86842.1 0.0 1 609 1 609
AEW72888.1 0.0 1 609 1 609
QCU05355.1 0.0 1 609 1 609
QLW25656.1 0.0 1 609 1 609

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V92_A 3.12e-35 106 348 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa]
7V91_A 5.44e-34 106 348 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]
4MST_A 3.36e-33 106 348 26 242
CrystalStructure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis],4MST_B Crystal Structure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis]
2BAA_A 2.29e-32 106 345 29 242
TheRefined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution [Hordeum vulgare]
3CQL_A 1.52e-31 106 345 29 242
CrystalStructure of GH family 19 chitinase from Carica papaya [Carica papaya],3CQL_B Crystal Structure of GH family 19 chitinase from Carica papaya [Carica papaya]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P52404 1.32e-37 106 348 94 310
Endochitinase 2 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB2 PE=2 SV=1
P52403 2.62e-37 106 348 96 312
Endochitinase 1 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB1 PE=2 SV=1
P52405 1.77e-36 106 348 96 312
Endochitinase 3 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB3 PE=2 SV=1
P24091 2.03e-36 106 348 102 318
Endochitinase B OS=Nicotiana tabacum OX=4097 GN=CHN50 PE=1 SV=1
Q05538 3.66e-36 106 348 100 316
Basic 30 kDa endochitinase OS=Solanum lycopersicum OX=4081 GN=CHI9 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000509 0.996572 0.002116 0.000348 0.000235 0.000186

TMHMM  Annotations      download full data without filtering help

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