Species | Phocaeicola dorei | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei | |||||||||||
CAZyme ID | MGYG000002478_00214 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 343946; End: 345373 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 47 | 394 | 1.2e-61 | 0.9261538461538461 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 3.20e-69 | 20 | 455 | 82 | 508 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam12708 | Pectate_lyase_3 | 2.25e-12 | 22 | 86 | 3 | 61 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
PLN02218 | PLN02218 | 4.01e-09 | 22 | 327 | 69 | 347 | polygalacturonase ADPG |
pfam00295 | Glyco_hydro_28 | 5.46e-09 | 108 | 350 | 36 | 264 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02188 | PLN02188 | 7.59e-07 | 20 | 327 | 36 | 312 | polygalacturonase/glycoside hydrolase family protein |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QJR61095.1 | 0.0 | 1 | 475 | 1 | 475 |
QJR65257.1 | 0.0 | 1 | 475 | 1 | 475 |
QJR54107.1 | 0.0 | 1 | 475 | 1 | 475 |
QJR73853.1 | 0.0 | 1 | 475 | 1 | 475 |
AII66396.1 | 0.0 | 1 | 475 | 1 | 475 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 1.74e-16 | 22 | 385 | 29 | 407 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
4MXN_A | 1.46e-13 | 17 | 215 | 18 | 215 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
2PYG_A | 3.70e-08 | 21 | 86 | 3 | 68 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYG_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYH_A Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii],2PYH_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii] |
3ZPP_A | 2.37e-07 | 22 | 255 | 25 | 253 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
5LW3_A | 2.78e-07 | 21 | 86 | 3 | 68 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q9ZFG9 | 5.78e-10 | 21 | 86 | 3 | 68 | Alginate lyase 7 OS=Azotobacter vinelandii OX=354 GN=algE7 PE=1 SV=1 |
P15922 | 6.36e-10 | 12 | 334 | 143 | 492 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
Q44495 | 9.83e-09 | 21 | 86 | 3 | 68 | Mannuronan C5-epimerase AlgE2 OS=Azotobacter vinelandii OX=354 GN=algE2 PE=1 SV=1 |
Q44494 | 1.07e-08 | 21 | 86 | 3 | 68 | Mannuronan C5-epimerase AlgE1 OS=Azotobacter vinelandii OX=354 GN=algE1 PE=1 SV=1 |
Q44492 | 1.30e-08 | 21 | 86 | 3 | 68 | Mannuronan C5-epimerase AlgE5 OS=Azotobacter vinelandii OX=354 GN=algE5 PE=2 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000493 | 0.998647 | 0.000231 | 0.000220 | 0.000195 | 0.000179 |
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